Miyakogusa Predicted Gene
- Lj6g3v0497370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0497370.1 Non Chatacterized Hit- tr|I1JG17|I1JG17_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42349
PE,76.53,0,CRM,RNA-binding, CRM domain; no description,RNA-binding,
CRM domain; seg,NULL; YhbY-like,RNA-binding,CUFF.57922.1
(1446 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70497 similar to UniRef100_O49444 Cluster: Copper-bin... 161 1e-38
gnl|LJGI|TC67354 similar to UniRef100_A7Q030 Cluster: Chromosome... 161 1e-38
gnl|LJGI|TC61701 similar to UniRef100_A7Q030 Cluster: Chromosome... 161 1e-38
>gnl|LJGI|TC70497 similar to UniRef100_O49444 Cluster: Copper-binding protein-like;
n=1; Arabidopsis thaliana|Rep: Copper-binding
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (13%)
Length = 681
Score = 161 bits (81), Expect = 1e-38
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1 atggtgcaacgacagagacatattttcccaattcttcggcacattcataagggagtggac 60
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 280 atggtgcaatggcagagacatattttcccaattcttcgtcacattcataagggagtggac 339
Query: 61 catgtctatcgttcagctccaaaccttttcatttcttgcataggctcttctttttcacaa 120
|||||||||| |||||||||||| |||| |||||| | || ||||||||||| |||||
Sbjct: 340 catgtctatcattcagctccaaagctttcaatttctcacttaagctcttcttttccacaa 399
Query: 121 gatcagttacagggggcgtcgacaacaac 149
| |||||| ||||| || | |||||||||
Sbjct: 400 ggtcagtttcagggagcatggacaacaac 428
>gnl|LJGI|TC67354 similar to UniRef100_A7Q030 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 1094
Score = 161 bits (81), Expect = 1e-38
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1 atggtgcaacgacagagacatattttcccaattcttcggcacattcataagggagtggac 60
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 104 atggtgcaatggcagagacatattttcccaattcttcgtcacattcataagggagtggac 163
Query: 61 catgtctatcgttcagctccaaaccttttcatttcttgcataggctcttctttttcacaa 120
|||||||||| |||||||||||| |||| |||||| | || ||||||||||| |||||
Sbjct: 164 catgtctatcattcagctccaaagctttcaatttctcacttaagctcttcttttccacaa 223
Query: 121 gatcagttacagggggcgtcgacaacaac 149
| |||||| ||||| || | |||||||||
Sbjct: 224 ggtcagtttcagggagcatggacaacaac 252
>gnl|LJGI|TC61701 similar to UniRef100_A7Q030 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 930
Score = 161 bits (81), Expect = 1e-38
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1 atggtgcaacgacagagacatattttcccaattcttcggcacattcataagggagtggac 60
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 99 atggtgcaatggcagagacatattttcccaattcttcgtcacattcataagggagtggac 158
Query: 61 catgtctatcgttcagctccaaaccttttcatttcttgcataggctcttctttttcacaa 120
|||||||||| |||||||||||| |||| |||||| | || ||||||||||| |||||
Sbjct: 159 catgtctatcattcagctccaaagctttcaatttctcacttaagctcttcttttccacaa 218
Query: 121 gatcagttacagggggcgtcgacaacaac 149
| |||||| ||||| || | |||||||||
Sbjct: 219 ggtcagtttcagggagcatggacaacaac 247