Miyakogusa Predicted Gene

Lj6g3v0485160.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0485160.1 tr|I1KPW3|I1KPW3_SOYBN Pectinesterase OS=Glycine
max GN=Gma.57654 PE=3 SV=1,86.94,0,seg,NULL;
PECTINESTERASE_2,Pectinesterase, active site; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,N,CUFF.57900.1
         (1047 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP070784 homologue to UniRef100_A7PEG1 Cluster: Chromos...   230   1e-59

>gnl|LJGI|BP070784 homologue to UniRef100_A7PEG1 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (23%)
          Length = 406

 Score =  230 bits (116), Expect = 1e-59
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                       
Query: 654 attcttgggagcacaggacacactctatgaccaagtgggtaggcattactataaggattg 713
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 attcttgggagcacaggacacactctatgaccaagtgggtaggcattactataaggattg 347

                                                                   
Query: 714 ctacattgaaggctctgttgatttcatttttggaaatgctctctctctgtttgagg 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctacattgaaggctctgttgatttcatttttggaaatgctctctctctgtttgagg 291



 Score = 77.8 bits (39), Expect = 1e-13
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                       
Query: 1005 gactgtattctatggacagtacaagtgctctggaccaggagca 1047
            |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 291  gactgtattctatggacagtaccagtgctctggaccaggagca 249