Miyakogusa Predicted Gene
- Lj6g3v0485150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0485150.1 Non Chatacterized Hit- tr|C5X1H6|C5X1H6_SORBI
Putative uncharacterized protein Sb01g021660
OS=Sorghu,33.45,9e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; seg,NULL; IQD (IQ-DOMAIN), CALMODULIN
BIN,CUFF.57898.1
(960 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76792 similar to UniRef100_A7PEG2 Cluster: Chromosome... 367 e-101
gnl|LJGI|TC81246 similar to UniRef100_A7PEG2 Cluster: Chromosome... 240 1e-62
gnl|LJGI|TC81095 similar to UniRef100_A7PI86 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|TC76792 similar to UniRef100_A7PEG2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 542
Score = 367 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 776 ccggtccgaagaagaggctttccctcactgatttgatggaatctaggagtagtttcagcg 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccggtccgaagaagaggctttccctcactgatttgatggaatctaggagtagtttcagcg 60
Query: 836 gggttcggatgcagaggtcttgctcacagattcaggaagctattagttttaagaatgatg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggttcggatgcagaggtcttgctcacagattcaggaagctattagttttaagaatgatg 120
Query: 896 tgatgagtaagcttgagaaatccactgaatttggtagggagacagacaaaactagatggt 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgagtaagcttgagaaatccactgaatttggtagggagacagacaaaactagatggt 180
Query: 956 gattg 960
|||||
Sbjct: 181 gattg 185
>gnl|LJGI|TC81246 similar to UniRef100_A7PEG2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 473
Score = 240 bits (121), Expect = 1e-62
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1 atgttcggtggtggacatcaaaggttggctgctgtcaagattcaaacagtttttagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atgttcggtggtggacatcaaaggttggctgctgtcaagattcaaacagtttttagagga 412
Query: 61 tacttagcaaggaaggcattgagagccttaaaaggattggtcaagttgcaggcacttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tacttagcaaggaaggcattgagagccttaaaaggattggtcaagttgcaggcacttgtg 472
Query: 121 a 121
|
Sbjct: 473 a 473
>gnl|LJGI|TC81095 similar to UniRef100_A7PI86 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 390
Score = 52.0 bits (26), Expect = 7e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 26 tggctgctgtcaagattcaaacagtttttagaggatacttagcaaggaaggcattgagag 85
||||||| ||||||||||||||| |||| | ||| |||| ||||| | ||||||||||
Sbjct: 115 tggctgcaatcaagattcaaacagcttttcggggacacttggcaagaagagcattgagag 174
Query: 86 ccttaaaaggattggtca 103
| |||| ||| |||||||
Sbjct: 175 ctttaagagggttggtca 192