Miyakogusa Predicted Gene

Lj6g3v0484020.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0484020.1 tr|C1FHE8|C1FHE8_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_62058
,26.15,0.0000007,seg,NULL; coiled-coil,NULL,CUFF.57906.1
         (609 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76829 similar to UniRef100_A7QPD7 Cluster: Chromosome...   636   0.0  
gnl|LJGI|TC75576                                                      585   e-166
gnl|LJGI|TC80353 similar to UniRef100_A7QPD7 Cluster: Chromosome...   212   2e-54

>gnl|LJGI|TC76829 similar to UniRef100_A7QPD7 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (53%)
          Length = 603

 Score =  636 bits (321), Expect = 0.0
 Identities = 324/325 (99%)
 Strand = Plus / Plus

                                                                       
Query: 285 cttatctcttgagaaaattcatcgtgaaggtagacaactagttaaaggtggttcttctcg 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cttatctcttgagaaaattcatcgtgaaggtagacaactagttaaaggtggttcttctcg 60

                                                                       
Query: 345 cccaaccattaaacaactgcagcagcgagttggcattaaacccacacttaatgattgctt 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cccaaccattaaacaactgcagcagcgagttggcattaaacccacacttaatgattgctt 120

                                                                       
Query: 405 ggatgggctgttgtttctacatgaaatacacaactctgagtatttattaaaatcatcagt 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatgggctgttgtttctacatgaaatacacaactctgagtatttattaaaatcatcagt 180

                                                                       
Query: 465 ggtctcagctttatcagcaatggccttaaaacccagtgccagtgatcttggtgcattgca 524
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtctcagctttatcagccatggccttaaaacccagtgccagtgatcttggtgcattgca 240

                                                                       
Query: 525 acaactcttggttgatcaacctaatctccttactgaggaagttcaatttgtatttgatgt 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaactcttggttgatcaacctaatctccttactgaggaagttcaatttgtatttgatgt 300

                                    
Query: 585 aatatttgctgaagaactatcttga 609
           |||||||||||||||||||||||||
Sbjct: 301 aatatttgctgaagaactatcttga 325


>gnl|LJGI|TC75576 
          Length = 646

 Score =  585 bits (295), Expect = e-166
 Identities = 295/295 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctttgacaatggaagccatggtgaaaaagtttcagtcaaaattcagaaaagtcagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atggctttgacaatggaagccatggtgaaaaagtttcagtcaaaattcagaaaagtcagg 411

                                                                       
Query: 61  gaagaaatgaatcagtggaatgagcttcagtcgtgcttaatttcacagtttagaaatgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gaagaaatgaatcagtggaatgagcttcagtcgtgcttaatttcacagtttagaaatgct 471

                                                                       
Query: 121 tcctatattgttgaaaggttagaggtgctccaaaattcccacaattatggtgttctgaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcctatattgttgaaaggttagaggtgctccaaaattcccacaattatggtgttctgaag 531

                                                                       
Query: 181 tgtgtcagtggtgtaagagaagctcttttggcaaagcagattgaatctttggtgaacatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtgtcagtggtgtaagagaagctcttttggcaaagcagattgaatctttggtgaacatt 591

                                                                  
Query: 241 ttggtctccatgaaaaagactttggaagactttcattgtgttgtcttatctcttg 295
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttggtctccatgaaaaagactttggaagactttcattgtgttgtcttatctcttg 646


>gnl|LJGI|TC80353 similar to UniRef100_A7QPD7 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 472

 Score =  212 bits (107), Expect = 2e-54
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                       
Query: 503 ccagtgatcttggtgcattgcaacaactcttggttgatcaacctaatctccttactgagg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  ccagtgatcttggtgcattgcaacaactcttggttgatcaacctaatctccttactgagg 108

                                                          
Query: 563 aagttcaatttgtatttgatgtaatatttgctgaagaactatcttga 609
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 aagttcaatttgtatttgatgtaatatttgctgaagaactatcttga 155