Miyakogusa Predicted Gene

Lj6g3v0467280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0467280.1 Non Chatacterized Hit- tr|B9S471|B9S471_RICCO
Putative uncharacterized protein OS=Ricinus communis G,53.57,4e-16,
,CUFF.58142.1
         (243 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76728 weakly similar to UniRef100_A7Q3P4 Cluster: Chr...   478   e-135

>gnl|LJGI|TC76728 weakly similar to UniRef100_A7Q3P4 Cluster: Chromosome chr13
           scaffold_48, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (63%)
          Length = 679

 Score =  478 bits (241), Expect = e-135
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtgcaatgcacttctggcaaacaatattggaggttatcatgtatgcacagccata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atggagtgcaatgcacttctggcaaacaatattggaggttatcatgtatgcacagccata 442

                                                                       
Query: 61  ggtcttggctcaaaaattgatgttgaagtcattgataagaaaaatccccacattggtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggtcttggctcaaaaattgatgttgaagtcattgataagaaaaatccccacattggtgtt 502

                                                                       
Query: 121 attgtcaaaatgtcgagcagtagccctaagtacaactgttcgctggctgtgtctgtgctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attgtcaaaatgtcgagcagtagccctaagtacaactgttcgctggctgtgtctgtgctt 562

                                                                       
Query: 181 tgcaatgtaaacagagtacaagcaccgcacactctggagaaattaggggcttgtaattat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgcaatgtaaacagagtacaagcaccgcacactctggagaaattaggggcttgtaattat 622

            
Query: 241 g 241
           |
Sbjct: 623 g 623