Miyakogusa Predicted Gene

Lj6g3v0465590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0465590.1 Non Chatacterized Hit- tr|G7J2C5|G7J2C5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,91.12,0,PC-Esterase,PC-Esterase; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,NODE_82601_length_846_cov_22.419622.path2.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78219 similar to UniRef100_A7Q3J4 Cluster: Chromosome...    60   1e-08
gnl|LJGI|TC57454 similar to UniRef100_A7PJF0 Cluster: Chromosome...    58   6e-08
gnl|LJGI|TC66910 similar to UniRef100_A7PJF0 Cluster: Chromosome...    54   9e-07

>gnl|LJGI|TC78219 similar to UniRef100_A7Q3J4 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 646

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 411 agctaaccctgctagctatgctgattgtatccattggtgtttaccaggacttcaagatac 470
           |||| |||||||||  ||||| |||||||| |||||||||||||||||| | |  || ||
Sbjct: 256 agctgaccctgctacttatgcagattgtatacattggtgtttaccaggattacccgacac 315

                     
Query: 471 ttggaatgag 480
           ||||||||||
Sbjct: 316 ttggaatgag 325


>gnl|LJGI|TC57454 similar to UniRef100_A7PJF0 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (85%)
          Length = 1370

 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 433  gattgtatccattggtgtttaccaggacttcaagatacttggaatgagcttct 485
            ||||||| |||||||||| | ||||||||||  ||||| ||||||||||||||
Sbjct: 1070 gattgtagccattggtgtcttccaggacttcctgatacatggaatgagcttct 1122


>gnl|LJGI|TC66910 similar to UniRef100_A7PJF0 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1387

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 431  ctgattgtatccattggtgtttaccaggacttcaagatacttggaatgagcttct 485
            ||||||| | |||||||||| | ||||||||||  ||||||||||||| ||||||
Sbjct: 1116 ctgattgcagccattggtgtcttccaggacttcctgatacttggaatgtgcttct 1170