Miyakogusa Predicted Gene
- Lj6g3v0435070.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0435070.2 tr|G7J5W4|G7J5W4_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g1,22.71,0.0000003,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; seg,NULL; PPR: pentatricopeptide
repea,CUFF.57841.2
(1390 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS330822 weakly similar to UniRef100_A7PR97 Cluster: Ch... 1338 0.0
gnl|LJGI|FS357011 similar to UniRef100_A7PR97 Cluster: Chromosom... 482 e-135
>gnl|LJGI|FS330822 weakly similar to UniRef100_A7PR97 Cluster: Chromosome chr14
scaffold_26, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_26, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 777
Score = 1338 bits (675), Expect = 0.0
Identities = 675/675 (100%)
Strand = Plus / Plus
Query: 1 atgccactctccgcaacaccaccgccaccaaaaaccctgtcaccaaaaacccaaaccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgccactctccgcaacaccaccgccaccaaaaaccctgtcaccaaaaacccaaaccctc 162
Query: 61 ttcgagatcatctccaccaccccctccgtcgccgtcgagaaagccctagaagattccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ttcgagatcatctccaccaccccctccgtcgccgtcgagaaagccctagaagattccggc 222
Query: 121 atcagggtcacccaaaacgatgtcgaagacgtcctcaagctctcctacgacatcccctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atcagggtcacccaaaacgatgtcgaagacgtcctcaagctctcctacgacatcccctcg 282
Query: 181 catgccgtcaagttcttccggtgggccggccaccgcctcctccatgaccacaccccctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 catgccgtcaagttcttccggtgggccggccaccgcctcctccatgaccacaccccctac 342
Query: 241 tcctggaacctcgtcgtcgatgtcctcggcaagaatctcctcttcgacgcaatgtgggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcctggaacctcgtcgtcgatgtcctcggcaagaatctcctcttcgacgcaatgtgggac 402
Query: 301 gccatcaactccatggccaagcgccctgggctcatctcgctagccacatttgcctccgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gccatcaactccatggccaagcgccctgggctcatctcgctagccacatttgcctccgtg 462
Query: 361 tttggcagctatgtcgcggcggggctccccggggatgctatctccaccttcgaggtgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttggcagctatgtcgcggcggggctccccggggatgctatctccaccttcgaggtgatg 522
Query: 421 gagaattaccggtgcgtgagggatgtcgtggcgttgaacacgctcatgagtgctgtgtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gagaattaccggtgcgtgagggatgtcgtggcgttgaacacgctcatgagtgctgtgtgc 582
Query: 481 agtggtgggaaaaccctagaggcttatgactatttgcaggatgtgaagaaggaaattagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agtggtgggaaaaccctagaggcttatgactatttgcaggatgtgaagaaggaaattagg 642
Query: 541 cctgatggtgacacctatgccattttgatggaagggtgggagagggaagggaatgctgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cctgatggtgacacctatgccattttgatggaagggtgggagagggaagggaatgctgtt 702
Query: 601 ggtgctaaagagacttttgctgagatggtgattgagagtggttgggaccctaccaatgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggtgctaaagagacttttgctgagatggtgattgagagtggttgggaccctaccaatgag 762
Query: 661 cctgcttatgattca 675
|||||||||||||||
Sbjct: 763 cctgcttatgattca 777
>gnl|LJGI|FS357011 similar to UniRef100_A7PR97 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 605
Score = 482 bits (243), Expect = e-135
Identities = 249/251 (99%)
Strand = Plus / Minus
Query: 1140 catggcgatgaaagtttggaagtgcgaggtggagcattaccggagggatttagaggatac 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 catggcgatgaaagtttggaagtgcgaggtggagcattaccggagggatttagaggatac 546
Query: 1200 cgcgaatttactggttgtagggcttagggatcttgatagggtcccggaagcggttaagta 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cgcgaatttactggttgtagggcttagggatcttgatagggtcccggaagcggttaagta 486
Query: 1260 tgctgaggatatgattggcagagggatcaagctaacctcttccacattgtctaagttgaa 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgctgaggatatgattggcagagggatcaagctaacctcttccacattgtctaagttgaa 426
Query: 1320 acacaggcttgtcaaaggaagaaaagaatttttgtatgaagagcttttgagaaagtggaa 1379
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 425 acacagccttgtcaaaggaagaaaagaatttgtgtatgaagagcttttgagaaagtggaa 366
Query: 1380 atcgcattagg 1390
|||||||||||
Sbjct: 365 atcgcattagg 355