Miyakogusa Predicted Gene

Lj6g3v0407330.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0407330.3 Non Chatacterized Hit- tr|I1KH61|I1KH61_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35294
PE,72.88,0.000000000000008, ,CUFF.57791.3
         (177 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81292 weakly similar to UniRef100_A7P7G9 Cluster: Chr...   335   5e-92
gnl|LJGI|TC57540 similar to UniRef100_A7P7G9 Cluster: Chromosome...   242   6e-64

>gnl|LJGI|TC81292 weakly similar to UniRef100_A7P7G9 Cluster: Chromosome chr9
           scaffold_7, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 472

 Score =  335 bits (169), Expect = 5e-92
 Identities = 175/177 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtactcctatgtctgaaagcgagaaactgatatggagtgttttagaagctgagcgc 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atgagtactcctatgtttgaaagcgagaaactgatatggagtgttttagaagctgagcgc 110

                                                                       
Query: 61  tcaactattagtcagctgcatgagaaaactctgtttgaggcaaacaactctttccttgaa 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tcaactattagtcaggtgcatgagaaaactctgtttgaggcaaacaactctttccttgaa 170

                                                                    
Query: 121 aaacataaagattctttgcagaattgtttcttcattattttgtttcttctctagaga 177
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aaacataaagattctttgcagaattgtttcttcattattttgtttcttctctagaga 227


>gnl|LJGI|TC57540 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 1223

 Score =  242 bits (122), Expect = 6e-64
 Identities = 134/138 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtactcctatgtctgaaagcgagaaactgatatggagtgttttagaagctgagcgc 60
           |||| ||||||| || |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgaatactcctgtgactgaaagcgagaaactgatatggagtgtcttagaagctgagcgc 185

                                                                       
Query: 61  tcaactattagtcagctgcatgagaaaactctgtttgaggcaaacaactctttccttgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tcaactattagtcagctgcatgagaaaactctgtttgaggcaaacaactctttccttgaa 245

                             
Query: 121 aaacataaagattctttg 138
           ||||||||||||||||||
Sbjct: 246 aaacataaagattctttg 263