Miyakogusa Predicted Gene

Lj6g3v0389100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0389100.1 Non Chatacterized Hit- tr|E1Z2C1|E1Z2C1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,26.32,1e-16,DOWNSTREAM NEIGHBOR OF SON,Donson;
seg,NULL,CUFF.57756.1
         (1782 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055991 similar to UniRef100_A7QFV0 Cluster: Chromosom...   155   1e-36
gnl|LJGI|AV776645 similar to UniRef100_A7QFV0 Cluster: Chromosom...    76   8e-13

>gnl|LJGI|BP055991 similar to UniRef100_A7QFV0 Cluster: Chromosome undetermined
            scaffold_89, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_89, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (9%)
          Length = 500

 Score =  155 bits (78), Expect = 1e-36
 Identities = 200/241 (82%)
 Strand = Plus / Minus

                                                                        
Query: 1540 gaagggagaagctttgaggcaagtttcttgacagaacctcgctcagttggcttgaatatt 1599
            ||||||||||||||||| ||||||||  || | |||||| ||||| ||||||||||| | 
Sbjct: 500  gaagggagaagctttgaagcaagttttgtggcggaacctagctcaattggcttgaatgta 441

                                                                        
Query: 1600 gctttaaaaccaacttctgagaagtgggaatataaagttgccggtagtgagaactcgcaa 1659
            || |||||||| |||| ||||||||  |||| ||| | ||| |  ||| | | || | ||
Sbjct: 440  gcgttaaaacccacttgtgagaagtcagaatctaaggctgctgccagtaaaagcttggaa 381

                                                                        
Query: 1660 gactgcagtgatacatttggcattgcagaagctgtagtcacgtcttgcttgtcgtcatgt 1719
            |||||||||||||| ||||||||| ||||||| |||||||||||| || ||| |||||||
Sbjct: 380  gactgcagtgatacctttggcattccagaagcggtagtcacgtctagcatgtggtcatgt 321

                                                                        
Query: 1720 tcactcaaaagcttaaagtactgtgaaggttcatatacgggatcactgtcccctgtataa 1779
            ||| | |||||||||||||||||  | | ||| ||||| | ||| |||||||||||||||
Sbjct: 320  tcagttaaaagcttaaagtactgcnatgcttcttatacagcatccctgtcccctgtataa 261

             
Query: 1780 t 1780
            |
Sbjct: 260  t 260


>gnl|LJGI|AV776645 similar to UniRef100_A7QFV0 Cluster: Chromosome undetermined
           scaffold_89, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_89, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (5%)
          Length = 264

 Score = 75.8 bits (38), Expect = 8e-13
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 23  gatccatggttaagagaaagacaccgttagaacttaggggagagcagttgaagcgagcaa 82
           ||||||||||||| |||||||| || |  |||||||||||||||||||||||||| ||||
Sbjct: 179 gatccatggttaaaagaaagacgccatcggaacttaggggagagcagttgaagcgggcaa 238

             
Query: 83  gt 84
           ||
Sbjct: 239 gt 240