Miyakogusa Predicted Gene
- Lj6g3v0389080.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0389080.2 Non Chatacterized Hit- tr|I1MZI6|I1MZI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.12,0,no
description,NULL; no description,Peptidase M24, structural domain;
SPT16,FACT complex subunit Spt,CUFF.57799.2
(3169 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79062 homologue to UniRef100_A7PRK6 Cluster: Chromoso... 920 0.0
gnl|LJGI|TC64800 similar to UniRef100_A7PRK6 Cluster: Chromosome... 841 0.0
gnl|LJGI|BP066052 similar to UniRef100_A7PRK6 Cluster: Chromosom... 309 6e-83
>gnl|LJGI|TC79062 homologue to UniRef100_A7PRK6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 492
Score = 920 bits (464), Expect = 0.0
Identities = 485/492 (98%)
Strand = Plus / Plus
Query: 2346 gaacaaaatcaatgtagaatttcagacctttgtgaatagagtgaatgatctctgggggca 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacaaaatcaatgtagaatttcagacctttgtgaatagagtgaatgatctctgggggca 60
Query: 2406 accacaattcaatggacttgacttggagtttgatcaacctctaagagaacttggcttccc 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accacaattcaatggacttgacttggagtttgatcaacctctaagagaacttggcttccc 120
Query: 2466 tggagtacctcataaatcttcagtatttattgttcctacttcagcctgccttgttgaact 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggagtacctcataaatcttcagtatttattgttcctacttcagcctgccttgttgaact 180
Query: 2526 gatagagatcccattccttgttgttacactaagtgagattgagattgtgaatctagagcg 2585
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 181 gatagagaccccattccttgttgtcacactaagtgagattgagattgtgaatctagagag 240
Query: 2586 agttgggcttgggcagaagaactttgatatgacaattgtgtttaaggacttcaagcggga 2645
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 241 agttgggcttgggcagaagaactttgatatgacaatagtatttaaggacttcaagcggga 300
Query: 2646 tgtgcttaggattgattctatcccttctacatcactagatggcatcaaggagtggcttga 2705
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgctcaggattgattctatcccttctacatcactagatggcatcaaggagtggcttga 360
Query: 2706 caccacagacatcaaatattacgagagtaggctgaatctgaactggcgtcagatcctaaa 2765
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 caccacagacatcaaatattacgagagtaggctgaatctgaactggcgtcagattctaaa 420
Query: 2766 gacaatcactgatgaccctcaaagctttattgaaggtggtggttgggagtttctgaattt 2825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacaatcactgatgaccctcaaagctttattgaaggtggtggttgggagtttctgaattt 480
Query: 2826 ggaagctactga 2837
||||||||||||
Sbjct: 481 ggaagctactga 492
>gnl|LJGI|TC64800 similar to UniRef100_A7PRK6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 720
Score = 841 bits (424), Expect = 0.0
Identities = 537/574 (93%), Gaps = 3/574 (0%)
Strand = Plus / Plus
Query: 2596 gggcagaagaactttgatatgacaattgtgtttaaggacttcaagcgggatgtgcttagg 2655
|||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 1 gggcagaagaactttgatatgacaatagtatttaaggactttaagcgggatgtgctcagg 60
Query: 2656 attgattctatcccttctacatcactagatggcatcaaggagtggcttgacaccacagac 2715
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 attgattctatcccttctacatcactggatggcatcaaggagtggcttgacaccacagac 120
Query: 2716 atcaaatattacgagagtaggctgaatctgaactggcgtcagatcctaaagacaatcact 2775
|||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 121 atcaaatattacgaaagcaggctgaatctgaactggcgccagatcctaaaaacaatcacg 180
Query: 2776 gatgaccctcaaagctttattgaaggtggtggttgggagtttctgaatttggaagctact 2835
||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |
Sbjct: 181 gatgaccctaaaagctttattgaaactggtggttgggagtttctgaacctggaagctagt 240
Query: 2836 gattcagaatctgataactcagaggagtctgataaaggttacgaaccatctgatgtggag 2895
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 gattcagaatctgataactcagaggagtcagataaaggttacgaaccatctgatgtggag 300
Query: 2896 ccggagtctgattctgaagatgaagattctgacagtgaatcacttgttgagtctgatgat 2955
||||||||||||||||||||||||| |||||| |||| ||| || ||||||||||| |||
Sbjct: 301 ccggagtctgattctgaagatgaagcttctgaaagtgcatcgctagttgagtctgaggat 360
Query: 2956 gatgatgaggaggatgaggactctgaggtagattcagaggaagagaagggaaagacatgg 3015
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 gatgat---gaggatgaggactctgaggtagattcagaggaagagaagggaaagacctgg 417
Query: 3016 gaagagctggagagggaagcaagcaatgcagatagggagaaagggaacgagtatgacagt 3075
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 418 gaagaactggagagggaagcaagcaatgcagatagggagaaagggcacgagtatgacagt 477
Query: 3076 gatgaagataggcagagaaggaaggcgaaagcctttggtaagtcacgagccggtgcaagt 3135
|| ||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 478 gaagaagataggcaaagaaggaaggtgaaagcctttggtaagtctcgagccagtgcaagt 537
Query: 3136 agtagcatgcccaagcgctccaagttaagataga 3169
||||||||||| ||||| || |||||||||||||
Sbjct: 538 agtagcatgccgaagcggtcaaagttaagataga 571
>gnl|LJGI|BP066052 similar to UniRef100_A7PRK6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 512
Score = 309 bits (156), Expect = 6e-83
Identities = 309/359 (86%), Gaps = 7/359 (1%)
Strand = Plus / Minus
Query: 29 ctattgatctgaatgcatttcaaaccagaatgaagacattttattcacattgggatgaac 88
||||||||||||||||||||||| || || ||| ||| |||||||||||||||||||||
Sbjct: 389 ctattgatctgaatgcatttcaatcccgattgaggactctttattcacattgggatgaac 330
Query: 89 acaaaactgatctctggggctcttgtgatgcaattgctgtggcatgtcctccgccttctg 148
||||||| ||||| |||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 329 acaaaacagatctgtggggctcttctgatgcaattgcaattgcatgtcctccaccttctg 270
Query: 149 aagatctgcgatacctgaaatctactgctctgaacttgtggctgcttggatttgagttcc 208
|||| ||||||||||| |||||||| ||||| ||||| ||| ||||||||||||| ||||
Sbjct: 269 aagacctgcgataccttaaatctaccgctctaaacttatggttgcttggatttgaattcc 210
Query: 209 cagagacgattatggtcttcacaaagaaacaagtccatatattgtgcagccaaaagaagg 268
|||| || |||||||| |||| ||||| || ||||||| ||||||||||||||||| |
Sbjct: 209 cagacacaattatggttttcatgaagaatcagatccatatcttgtgcagccaaaagaaag 150
Query: 269 catccattcttgaatcagtc-aaaaaacctgccaaagaggcagttggtg------cggaa 321
|||| ||||||||||| ||| |||||||||||| ||| |||||||||| ||||
Sbjct: 149 catctattcttgaatctgtcaaaaaaacctgcccgagaagcagttggtgtagaactggaa 90
Query: 322 attgttttgcatgtcaagcctaagaatgatgatggaaccactcttatggattctatatt 380
|||||||||||||||||||||| ||||||||||| || |||| |||||| |||||||
Sbjct: 89 gttgttttgcatgtcaagcctaaaaatgatgatggcactgctctaatggatgctatatt 31