Miyakogusa Predicted Gene

Lj6g3v0389080.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0389080.1 Non Chatacterized Hit- tr|F6I4V8|F6I4V8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80.47,0,TRANSCRIPTION REGULATION,NULL; CDC68 RELATED,NULL;
seg,NULL,CUFF.57799.1
         (507 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64800 similar to UniRef100_A7PRK6 Cluster: Chromosome...   983   0.0  
gnl|LJGI|TC79062 homologue to UniRef100_A7PRK6 Cluster: Chromoso...   333   6e-91

>gnl|LJGI|TC64800 similar to UniRef100_A7PRK6 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 720

 Score =  983 bits (496), Expect = 0.0
 Identities = 496/496 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacaatagtatttaaggactttaagcgggatgtgctcaggattgattctatcccttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19  atgacaatagtatttaaggactttaagcgggatgtgctcaggattgattctatcccttct 78

                                                                       
Query: 61  acatcactggatggcatcaaggagtggcttgacaccacagacatcaaatattacgaaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  acatcactggatggcatcaaggagtggcttgacaccacagacatcaaatattacgaaagc 138

                                                                       
Query: 121 aggctgaatctgaactggcgccagatcctaaaaacaatcacggatgaccctaaaagcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 aggctgaatctgaactggcgccagatcctaaaaacaatcacggatgaccctaaaagcttt 198

                                                                       
Query: 181 attgaaactggtggttgggagtttctgaacctggaagctagtgattcagaatctgataac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 attgaaactggtggttgggagtttctgaacctggaagctagtgattcagaatctgataac 258

                                                                       
Query: 241 tcagaggagtcagataaaggttacgaaccatctgatgtggagccggagtctgattctgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcagaggagtcagataaaggttacgaaccatctgatgtggagccggagtctgattctgaa 318

                                                                       
Query: 301 gatgaagcttctgaaagtgcatcgctagttgagtctgaggatgatgatgaggatgaggac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatgaagcttctgaaagtgcatcgctagttgagtctgaggatgatgatgaggatgaggac 378

                                                                       
Query: 361 tctgaggtagattcagaggaagagaagggaaagacctgggaagaactggagagggaagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctgaggtagattcagaggaagagaagggaaagacctgggaagaactggagagggaagca 438

                                                                       
Query: 421 agcaatgcagatagggagaaagggcacgagtatgacagtgaagaagataggcaaagaagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agcaatgcagatagggagaaagggcacgagtatgacagtgaagaagataggcaaagaagg 498

                           
Query: 481 aaggtgaaagcctttg 496
           ||||||||||||||||
Sbjct: 499 aaggtgaaagcctttg 514


>gnl|LJGI|TC79062 homologue to UniRef100_A7PRK6 Cluster: Chromosome chr14
           scaffold_27, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 492

 Score =  333 bits (168), Expect = 6e-91
 Identities = 207/220 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacaatagtatttaaggactttaagcgggatgtgctcaggattgattctatcccttct 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgacaatagtatttaaggacttcaagcgggatgtgctcaggattgattctatcccttct 328

                                                                       
Query: 61  acatcactggatggcatcaaggagtggcttgacaccacagacatcaaatattacgaaagc 120
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 329 acatcactagatggcatcaaggagtggcttgacaccacagacatcaaatattacgagagt 388

                                                                       
Query: 121 aggctgaatctgaactggcgccagatcctaaaaacaatcacggatgaccctaaaagcttt 180
           |||||||||||||||||||| ||||| ||||| |||||||| ||||||||| ||||||||
Sbjct: 389 aggctgaatctgaactggcgtcagattctaaagacaatcactgatgaccctcaaagcttt 448

                                                   
Query: 181 attgaaactggtggttgggagtttctgaacctggaagcta 220
           ||||||  |||||||||||||||||||||  |||||||||
Sbjct: 449 attgaaggtggtggttgggagtttctgaatttggaagcta 488