Miyakogusa Predicted Gene
- Lj6g3v0366950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0366950.1 gi|1370177|emb|Z73938.1|.path1.1
(606 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57193 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus jap... 1201 0.0
gnl|LJGI|TC57678 homologue to UniRef100_Q41668 Cluster: Guanine ... 779 0.0
gnl|LJGI|AV419800 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus ja... 343 8e-94
gnl|LJGI|GO031991 homologue to UniRef100_Q41668 Cluster: Guanine... 323 7e-88
gnl|LJGI|TC74657 similar to UniRef100_Q41668 Cluster: Guanine nu... 226 1e-58
gnl|LJGI|DC597008 homologue to UniRef100_Q40209 Cluster: RAB5A; ... 182 2e-45
>gnl|LJGI|TC57193 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus japonicus|Rep: RAB5A -
Lotus japonicus, complete
Length = 1135
Score = 1201 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 1 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 271
Query: 61 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 331
Query: 121 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaactgttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaactgttaaa 391
Query: 181 tttgagatttgggacacagcggggcaagagaggtaccatagcttggctcccatgtattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttgagatttgggacacagcggggcaagagaggtaccatagcttggctcccatgtattac 451
Query: 241 agaggcgctgctgctgctatcattgtctacgacatcactagctcagattcgtttacacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agaggcgctgctgctgctatcattgtctacgacatcactagctcagattcgtttacacga 511
Query: 301 gctaagaagtgggtccaagagcttcaaaagcaagggaaccctaacatggtcatggctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gctaagaagtgggtccaagagcttcaaaagcaagggaaccctaacatggtcatggctttc 571
Query: 361 gctggtaacaaatctgacttggaagataagagaaaagtgactgctgatgaggcacgtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gctggtaacaaatctgacttggaagataagagaaaagtgactgctgatgaggcacgtgtt 631
Query: 421 tatgctgaagaaaatggtctgtttttcatggagacctctgccaaaactgcagccaatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tatgctgaagaaaatggtctgtttttcatggagacctctgccaaaactgcagccaatgtt 691
Query: 481 aatgatgtattttatgaaatagccaagaggttaccaagggctcagccagctcaaaaccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aatgatgtattttatgaaatagccaagaggttaccaagggctcagccagctcaaaaccca 751
Query: 541 gcagggatggttcttgttgatagacccgccgaaggagctagggcttcatcatgttgttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gcagggatggttcttgttgatagacccgccgaaggagctagggcttcatcatgttgttca 811
Query: 601 taaagt 606
||||||
Sbjct: 812 taaagt 817
>gnl|LJGI|TC57678 homologue to UniRef100_Q41668 Cluster: Guanine nucleotide
regulatory protein; n=1; Vicia faba|Rep: Guanine
nucleotide regulatory protein - Vicia faba (Broad bean),
complete
Length = 1059
Score = 779 bits (393), Expect = 0.0
Identities = 549/601 (91%)
Strand = Plus / Plus
Query: 1 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 60
||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 148 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 207
Query: 61 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 120
|||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 208 actggaaaatccagcctcgttttgcgttttgtcaagggtcaattccttgaatttcaggaa 267
Query: 121 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaactgttaaa 180
|||||||||||||| ||||||||||| ||||| |||||||||| ||||| || || |||
Sbjct: 268 tcaacaataggggcagcattcttttcacagacactggcagtaaatgatgccacagtgaaa 327
Query: 181 tttgagatttgggacacagcggggcaagagaggtaccatagcttggctcccatgtattac 240
|||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 328 tttgagatttgggacacagcaggacaagagagataccatagcttggctcccatgtattac 387
Query: 241 agaggcgctgctgctgctatcattgtctacgacatcactagctcagattcgtttacacga 300
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||
Sbjct: 388 agaggcgctgctgctgctatcattgtctatgacattactagctcagattcatttacaaga 447
Query: 301 gctaagaagtgggtccaagagcttcaaaagcaagggaaccctaacatggtcatggctttc 360
||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |||| |
Sbjct: 448 gctaaaaagtgggtccaagagcttcagaagcaagggaatcctaatatggttgtggcccta 507
Query: 361 gctggtaacaaatctgacttggaagataagagaaaagtgactgctgatgaggcacgtgtt 420
|||||||||||||||||||||||||||||||| |||||||| |||| || ||||| ||
Sbjct: 508 gctggtaacaaatctgacttggaagataagaggaaagtgacgcctgaagaagcacgcgta 567
Query: 421 tatgctgaagaaaatggtctgtttttcatggagacctctgccaaaactgcagccaatgtt 480
||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 568 tatgctgaagacaatggtctatttttcatggagacctctgcaaaaactgctgccaatgtt 627
Query: 481 aatgatgtattttatgaaatagccaagaggttaccaagggctcagccagctcaaaaccca 540
||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 628 aatgatgtattttatgaaatagccaagaggttaccaagggcacagcctgcgcaaaaccca 687
Query: 541 gcagggatggttcttgttgatagacccgccgaaggagctagggcttcatcatgttgttca 600
|||||||||||||||||||||||||| || |||||| | || ||| ||||||||||||||
Sbjct: 688 gcagggatggttcttgttgatagacctgcagaaggatccagagctgcatcatgttgttca 747
Query: 601 t 601
|
Sbjct: 748 t 748
>gnl|LJGI|AV419800 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus japonicus|Rep: RAB5A -
Lotus japonicus, partial (28%)
Length = 426
Score = 343 bits (173), Expect = 8e-94
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 313
Query: 61 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 373
Query: 121 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaac 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaac 426
>gnl|LJGI|GO031991 homologue to UniRef100_Q41668 Cluster: Guanine nucleotide
regulatory protein; n=1; Vicia faba|Rep: Guanine
nucleotide regulatory protein - Vicia faba (Broad bean),
partial (62%)
Length = 632
Score = 323 bits (163), Expect = 7e-88
Identities = 244/271 (90%)
Strand = Plus / Plus
Query: 331 caagggaaccctaacatggtcatggctttcgctggtaacaaatctgacttggaagataag 390
|||||||| ||||| ||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 240 caagggaatcctaatatggttgtggccctagctggtaacaaatctgacttggaagataag 299
Query: 391 agaaaagtgactgctgatgaggcacgtgtttatgctgaagaaaatggtctgtttttcatg 450
|| |||||||| |||| || ||||| || ||||||||||| |||||||| |||||||||
Sbjct: 300 aggaaagtgacgcctgaagaagcacgcgtatatgctgaagacaatggtctatttttcatg 359
Query: 451 gagacctctgccaaaactgcagccaatgttaatgatgtattttatgaaatagccaagagg 510
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gagacctctgcaaaaactgctgccaatgttaatgatgtattttatgaaatagccaagagg 419
Query: 511 ttaccaagggctcagccagctcaaaacccagcagggatggttcttgttgatagacccgcc 570
||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 420 ttaccaagggcacagcctgcgcaaaacccagcagggatggttcttgttgatagacctgca 479
Query: 571 gaaggagctagggcttcatcatgttgttcat 601
|||||| | || ||| |||||||||||||||
Sbjct: 480 gaaggatccagagctgcatcatgttgttcat 510
Score = 147 bits (74), Expect = 9e-35
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 60
||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 148 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 207
Query: 61 gctggaaaatccagccttgttttgcgctttgtcaaggg 98
|||||||||||||||| |||||||| |||||||||||
Sbjct: 208 actggaaaatccagcctcgttttgcgttttgtcaaggg 245
>gnl|LJGI|TC74657 similar to UniRef100_Q41668 Cluster: Guanine nucleotide regulatory
protein; n=1; Vicia faba|Rep: Guanine nucleotide
regulatory protein - Vicia faba (Broad bean), partial
(32%)
Length = 597
Score = 226 bits (114), Expect = 1e-58
Identities = 171/190 (90%)
Strand = Plus / Plus
Query: 412 gcacgtgtttatgctgaagaaaatggtctgtttttcatggagacctctgccaaaactgca 471
||||| || ||||||||||| |||||||| ||||||||||||||||||||| |||||||
Sbjct: 10 gcacgcgtatatgctgaagacaatggtctatttttcatggagacctctgcctaaactgct 69
Query: 472 gccaatgttaatgatgtattttatgaaatagccaagaggttaccaagggctcagccagct 531
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 70 gcccatgttaatgatgtattttatgaaatagccaagaggttaccaagggcacagcctgcg 129
Query: 532 caaaacccagcagggatggttcttgttgatagacccgccgaaggagctagggcttcatca 591
| | ||||||| ||||||||||||||||||||||| || |||||| | || ||| |||||
Sbjct: 130 ccatacccagccgggatggttcttgttgatagacctgcagaaggatccagagctgcatca 189
Query: 592 tgttgttcat 601
||||||||||
Sbjct: 190 tgttgttcat 199
>gnl|LJGI|DC597008 homologue to UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus
japonicus|Rep: RAB5A - Lotus japonicus, partial (30%)
Length = 397
Score = 182 bits (92), Expect = 2e-45
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 39 ggttctcctcggggatatgggtgctggaaaatccagccttgttttgcgctttgtcaaggg 98
|||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||
Sbjct: 258 ggttctcctcggggatatgggtactggaaaatccagcctcgttttgcgttttgtcaaggg 317
Query: 99 tcaatttctcgaatttcaggaatcaacaataggggcggcattcttttcgcagactttggc 158
|||||| || |||||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 318 tcaattccttgaatttcaggaatcaacaataggggcagcattcttttcacagacactggc 377
Query: 159 agtaaacgatgc 170
|||||| |||||
Sbjct: 378 agtaaatgatgc 389
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 atggctacgatcgggcacaacaatctcaatgctaaattggt 41
||||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 125 atggctacggtcggacacaacaatctcaatgccaaattggt 165