Miyakogusa Predicted Gene
- Lj6g3v0365870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0365870.1 Non Chatacterized Hit- tr|K3YW08|K3YW08_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018454,35.22,5e-19,A_tha_TIGR01569: plant integral membrane
protein T,Uncharacterised protein family UPF0497,
trans-mem,CUFF.57734.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65473 similar to UniRef100_A7QBZ2 Cluster: Chromosome... 1273 0.0
gnl|LJGI|TC79142 similar to UniRef100_A7QBZ2 Cluster: Chromosome... 168 3e-41
gnl|LJGI|BP070636 similar to UniRef100_A7QBZ2 Cluster: Chromosom... 76 3e-13
>gnl|LJGI|TC65473 similar to UniRef100_A7QBZ2 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 860
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 atggataaagaaaccgcagtagcagctgcaagatctcccatgcaacttatgatgggaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atggataaagaaaccgcagtagcagctgcaagatctcccatgcaacttatgatgggaact 99
Query: 61 gctgcaagtggtggtgaggaattagaaggcaacggcgccaccaccctacgctcacttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gctgcaagtggtggtgaggaattagaaggcaacggcgccaccaccctacgctcacttgag 159
Query: 121 accttcctgcgtctccttcctattggtctctgtgtatcagcgcttgtcctcatgcttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 accttcctgcgtctccttcctattggtctctgtgtatcagcgcttgtcctcatgcttaag 219
Query: 181 aactctcaagaaaacgattatggctctgttgactacactgatcttggacctttcaggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aactctcaagaaaacgattatggctctgttgactacactgatcttggacctttcaggtat 279
Query: 241 ttggtacatgcgaatggtatttgtgctggttactctctactttcagcggtttttgttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttggtacatgcgaatggtatttgtgctggttactctctactttcagcggtttttgttgct 339
Query: 301 gtgccacgcccttcccccaccatgtcccgtgcttggactttctttttgctcgaccaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtgccacgcccttcccccaccatgtcccgtgcttggactttctttttgctcgaccaggta 399
Query: 361 ctaacgtacataattctgggtgcgggagctgcatcaacggaggtgttgtacctgatggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctaacgtacataattctgggtgcgggagctgcatcaacggaggtgttgtacctgatggag 459
Query: 421 aagggagacgccggaacaacgtggagctcagcttgtggttcatttggtcgattttgtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aagggagacgccggaacaacgtggagctcagcttgtggttcatttggtcgattttgtaat 519
Query: 481 aagttgacagcaacaacagctatcacatttgtggcggtgctttgctatgtgctgctttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aagttgacagcaacaacagctatcacatttgtggcggtgctttgctatgtgctgctttct 579
Query: 541 atcatttcctcctataaactcttcaccaagtacggtgcccctgcaactgccactacaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atcatttcctcctataaactcttcaccaagtacggtgcccctgcaactgccactacaacc 639
Query: 601 atcgaggttgctgccgccactgccacccctttccatggctag 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 atcgaggttgctgccgccactgccacccctttccatggctag 681
>gnl|LJGI|TC79142 similar to UniRef100_A7QBZ2 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 951
Score = 168 bits (85), Expect = 3e-41
Identities = 363/455 (79%), Gaps = 3/455 (0%)
Strand = Plus / Plus
Query: 118 gagaccttcctgcgtctccttcctattggtctctgtgtatcagcgcttgtcctcatgctt 177
||||| ||||||||| | |||| |||||| | ||||| | ||||||||| | ||||||
Sbjct: 129 gagacgttcctgcgtttgtttccaattggtttgtgtgtgacggcgcttgtcattatgctt 188
Query: 178 aagaactctcaagaaaacgattatggctctgttgactacactgatcttggacctttcagg 237
||||||||||| ||||| || |||||| | ||||||||||||| ||| | ||||||||
Sbjct: 189 aagaactctcaggaaaatgagtatggcacgcttgactacactgaccttagtgctttcagg 248
Query: 238 tatttggtacatgcgaatggtatttgtgctggttactctctactttcagcggtttttgtt 297
|||||||| ||||| ||||| |||||||| || || || || | ||||| || || ||
Sbjct: 249 tatttggtgcatgcaaatggcatttgtgcaggctattcattattctcagcagtcattatt 308
Query: 298 gctgtgccacgcccttcccccaccatgtcccgtgcttggactttctttttgctcgaccag 357
||| |||| |||| || |||||||| | | ||||||||||||||| |||| ||||||
Sbjct: 309 gctttgccccgcc---cctccaccatgccaagagcttggactttctttgtgcttgaccag 365
Query: 358 gtactaacgtacataattctgggtgcgggagctgcatcaacggaggtgttgtacctgatg 417
| || || |||||||| |||| ||| |||||| |||| ||||||| |||||||||
Sbjct: 366 ttgcttacatacataatcctggctgccggagctctgtcaatggaggtgctgtacctgact 425
Query: 418 gagaagggagacgccggaacaacgtggagctcagcttgtggttcatttggtcgattttgt 477
|||||||||||| | | || | ||||| ||||||||||| | ||||||| |||||||
Sbjct: 426 gagaagggagaccctccagcagcctggagttcagcttgtgggtactttggtccattttgt 485
Query: 478 aataagttgacagcaacaacagctatcacatttgtggcggtgctttgctatgtgctgctt 537
| ||| |||||| ||| ||||||||||||||| || || |||||||||| |||||
Sbjct: 486 cacaaggccacagcatcaatagctatcacatttgttgctgtcatttgctatgttgtgctt 545
Query: 538 tctatcatttcctcctataaactcttcaccaagta 572
|| ||||||||||||| || ||||||| ||||||
Sbjct: 546 tcactcatttcctcctacaagctcttcagcaagta 580
>gnl|LJGI|BP070636 similar to UniRef100_A7QBZ2 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 393
Score = 75.8 bits (38), Expect = 3e-13
Identities = 164/206 (79%)
Strand = Plus / Plus
Query: 367 tacataattctgggtgcgggagctgcatcaacggaggtgttgtacctgatggagaaggga 426
|||||||| |||| ||| |||||| |||| ||||||| ||||||||| |||||||||
Sbjct: 151 tacataatcctggctgccggagctctgtcaatggaggtgctgtacctgactgagaaggga 210
Query: 427 gacgccggaacaacgtggagctcagcttgtggttcatttggtcgattttgtaataagttg 486
||| | | || | ||||| ||||||||||| | ||||||| |||| || | |||
Sbjct: 211 gaccctccagcagcctggagttcagcttgtgggtactttggtccatttggtcacaaggcc 270
Query: 487 acagcaacaacagctatcacatttgtggcggtgctttgctatgtgctgctttctatcatt 546
|||||| ||| |||||||||||| || || || |||||||||| ||||||| |||||
Sbjct: 271 acagcatcaatagctatcacattggttgctgtcatttgctatgttgtgctttcactcatt 330
Query: 547 tcctcctataaactcttcaccaagta 572
|||||||| || ||||||| ||||||
Sbjct: 331 tcctcctacaagctcttcagcaagta 356