Miyakogusa Predicted Gene
- Lj6g3v0365860.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0365860.3 Non Chatacterized Hit- tr|K4B1Q8|K4B1Q8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,37.69,5e-18,no
description,Zinc finger, RING/FYVE/PHD-type; no description,NULL;
SWIB/MDM2 domain,SWIB/MDM2 doma,CUFF.57745.3
(2922 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV775980 weakly similar to UniRef100_A7QCA6 Cluster: Ch... 817 0.0
gnl|LJGI|GO018471 similar to UniRef100_A7QCA6 Cluster: Chromosom... 383 e-105
gnl|LJGI|TC60412 similar to UniRef100_A6DT53 Cluster: BatB prote... 272 1e-71
gnl|LJGI|TC74638 similar to UniRef100_A7QCA6 Cluster: Chromosome... 68 3e-10
>gnl|LJGI|AV775980 weakly similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 480
Score = 817 bits (412), Expect = 0.0
Identities = 460/473 (97%), Gaps = 4/473 (0%)
Strand = Plus / Plus
Query: 113 cttatcatcctcgttgcgtgggatacgatgatacttttttggaggatgacagttattgga 172
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9 cttatcatcctcgttgcgtgggatacgatgatacttttttggaggatgacagttat-gga 67
Query: 173 cttgtggttcacattttt-gtgaccgttgccgtaaaacatctcagtttaggtgcttatgc 231
||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cttgtggttcacagttgtcgtgaccgttgccgtaaaacatctcagtttaggtgcttatgc 127
Query: 232 tgcccaagtgctgtttgtgggaagtgcatctattttggtgaatttgccattatcaaaggg 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tgcccaagtgctgtttgtgggaagtgcatctattttggtgaatttgccattatcaaaggg 187
Query: 292 aagaaaggagtttgcagacactgctcaaaacttgcgtttctaattgaaggaaatgccgat 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aagaaaggagtttgcagacactgctcaaaacttgcgtttctaattgaaggaaatgccgat 247
Query: 352 gttgattctgatggtggaaatatagatttcaaagatcgagagacatatgaatgcttattt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gttgattctgatggtggaaatatagatttcaaagatcgagagacatatgaatgcttattt 307
Query: 412 gcagaatattatgaaattatnnnnnnnga-agaagggctg-aattctcaacatgtacact 469
|||||||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct: 308 gcagaatattatgaaattataaaaaaagagagaagggctgcaattctcaacatgtacact 367
Query: 470 ctgcccgtaacttcttgaagaatagcaaaaacaagagtgagttggatctagatgaaatag 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctgcccgtaacttcttgaagaatagcaaaaacaagagtgagttggatctagatgaaatag 427
Query: 530 ctgaagaggaagatgatagtggagaatctgaagatggaagtgactttgaagtt 582
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgaagaggaagatgatagtggagaatctgaagatggaagtgactttgaagtt 480
>gnl|LJGI|GO018471 similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 741
Score = 383 bits (193), Expect = e-105
Identities = 352/401 (87%), Gaps = 3/401 (0%)
Strand = Plus / Plus
Query: 28 aaggaagagattgcggaggattggtgttttgtgtgcaaggatggagggctcttgagggtg 87
|||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 335 aaggaagagattgctgaggattggtgttttgagtgcatggatggaggcaagttgagggtg 394
Query: 88 tgtgattatggggattgccttaaagcttatcatcctcgttgcgtgggatacgatgatact 147
|| |||||| ||| |||||||||||||||||||||| |||||||||| | |||||| ||
Sbjct: 395 tgcgattataggggttgccttaaagcttatcatcctgattgcgtgggaaaagatgattct 454
Query: 148 tttttggaggatgacagttattggacttgtggttcacatttttgtgaccgttgccgtaaa 207
|||||||||||| ||||| |||||||||| ||||||||||||| ||||||| |||||
Sbjct: 455 tttttggaggataacagtcattggacttgccgttcacatttttgccaccgttgtggtaaa 514
Query: 208 acatctcagtttaggtgcttatgctgcccaagtgctgtttgtgggaagtgcatctatttt 267
|||||| ||||| |||| ||||||||||||| |||||||||| |||| |||| | ||||
Sbjct: 515 acatctaagttttggtgtttatgctgcccaaatgctgtttgtaggaactgcaccaatttg 574
Query: 268 ggtgaatttgccattatcaaagggaagaaaggagtttgcagacactgctcaaaacttgcg 327
||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 575 ggtgaatttgctgttgtcaaagggaggaaaggattttgcagacactgctcaaaacttgcc 634
Query: 328 tttctaattgaaggaaatgccgatgttgattctgatggtggaaatatagatttcaaagat 387
||||| ||||||| |||||| | ||||||||||||||| | |||| |||||||| |||||
Sbjct: 635 tttct-attgaagaaaatgctggtgttgattctgatggggaaaatgtagatttc-aagat 692
Query: 388 cgagagacatatgaatgcttatttgcagaatattatgaaat 428
||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 693 cgagagacatatgaatgcttattctcag-atattatgaaat 732
Score = 81.8 bits (41), Expect = 2e-14
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 28 aaggaagagattgcggaggattggtgttttgtgtgcaaggatggagggctcttgagggtg 87
|||||| ||||||| ||||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 126 aaggaaaagattgctgaggattggtgttttgtgtacaaggatagagggctcatgagggtc 185
Query: 88 tgtgattat 96
|| ||||||
Sbjct: 186 tgcgattat 194
>gnl|LJGI|TC60412 similar to UniRef100_A6DT53 Cluster: BatB protein; n=1; Lentisphaera
araneosa HTCC2155|Rep: BatB protein - Lentisphaera
araneosa HTCC2155, partial (3%)
Length = 873
Score = 272 bits (137), Expect = 1e-71
Identities = 197/217 (90%)
Strand = Plus / Plus
Query: 2704 tctcttgagtcaaagaagaaagaagttgaaaacctcacatctttacttcttagggcggcc 2763
||||| ||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 447 tctctcgaggcaaagaagaaagaagttgataatctcaaatctttacttcttagggcggcg 506
Query: 2764 aaaggagcttttgacaatgcagtcaatcagctgacaattcttaatcccggactcaagatt 2823
||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct: 507 gaaggaacttttgacaatgcagtcaatcagctcagaattcttaatcccggactcaatatt 566
Query: 2824 gaaggagctgcttctgatagggttgctcgggaagggaaaatttgtaatgttaaggaagga 2883
|||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 567 gaaggagctgcttccaatagggttgctcgggaaggacaaatttgtcatgttaaggaagga 626
Query: 2884 aaatgtattccttgcccggatgttcatcctcctgagt 2920
|||| ||||||||||| ||||| |||||||||||||
Sbjct: 627 aaattcattccttgcccagatgtccatcctcctgagt 663
Score = 262 bits (132), Expect = 1e-68
Identities = 213/240 (88%)
Strand = Plus / Plus
Query: 1745 ccaaacacaatggttttgctcgatgtctaaataaaagaacagatgttgcggatttgccag 1804
|||||||||||||||| | || ||||| ||||||||| ||||| |||||| ||||||||
Sbjct: 1 ccaaacacaatggtttaggtcaatgtccgaataaaagagcagatattgcgggtttgccag 60
Query: 1805 ttgagaatgatatggatccttctgacttgatgacccaaatccttgcaattcaggagcaac 1864
||||||| || || ||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 61 ttgagaacgacattgatccatctgacttgatgactcaaatcctagcaattcaggagcaac 120
Query: 1865 aaaaacataaagttagtcaagatgccgagcaagccaaggatcaagaaaacgacccgacca 1924
||||| |||||| ||| |||| |||||||||||||||||||||||||||| |||||
Sbjct: 121 gtaaacaaaaagttgatcatgatgttgagcaagccaaggatcaagaaaacgacctgacca 180
Query: 1925 cccttgttgctgatggaattggcaagcaacatggagctcctgattttggagttgctgata 1984
|||||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 181 cccttgttgctgatggaactggcaagcaacatggagcccctgattttggagctactgata 240
Score = 129 bits (65), Expect = 1e-28
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 2477 tgggaactcttgaagaagatgttctcagcttaaagactaagtgttcttatgctgaagctt 2536
|||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 304 tgggaattcttgaagaagaagttgtcagcttaaagactaagtgttctactgctgaagctt 363
Query: 2537 ctgctacctctgccgctgcctcttttgaagagaagaagaaagaagttgaaaacctcc 2593
||| |||||||| ||||| ||||||||||||||||||| |||| ||||| |||||
Sbjct: 364 ttgcgacctctgctgctgctgcttttgaagagaagaagaaggaagctgaaatcctcc 420
>gnl|LJGI|TC74638 similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 614
Score = 67.9 bits (34), Expect = 3e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 43 gaggattggtgttttgtgtgcaaggatggagggctcttgagggtgtgtgattat 96
||||||||||| |||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 162 gaggattggtgctttgcttgcaaggatggagggctcatgagggtgtgcgattat 215
Score = 60.0 bits (30), Expect = 8e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 98 gggattgccttaaagcttatcatcctcgttgcgtggga 135
||||||| ||||||||||||||||||| ||||||||||
Sbjct: 335 gggattgtcttaaagcttatcatcctcattgcgtggga 372