Miyakogusa Predicted Gene
- Lj6g3v0365860.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0365860.2 Non Chatacterized Hit- tr|K3XDQ8|K3XDQ8_SETIT
Uncharacterized protein OS=Setaria italica GN=Si000025,34.17,2e-18,no
description,Zinc finger, RING/FYVE/PHD-type; FYVE/PHD zinc finger,Zinc
finger, FYVE/PHD-type; Sho,CUFF.57745.2
(1860 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60412 similar to UniRef100_A6DT53 Cluster: BatB prote... 1310 0.0
gnl|LJGI|GO018471 similar to UniRef100_A7QCA6 Cluster: Chromosom... 801 0.0
gnl|LJGI|AV775980 weakly similar to UniRef100_A7QCA6 Cluster: Ch... 464 e-129
gnl|LJGI|BP064218 76 9e-13
gnl|LJGI|TC74638 similar to UniRef100_A7QCA6 Cluster: Chromosome... 62 1e-08
>gnl|LJGI|TC60412 similar to UniRef100_A6DT53 Cluster: BatB protein; n=1; Lentisphaera
araneosa HTCC2155|Rep: BatB protein - Lentisphaera
araneosa HTCC2155, partial (3%)
Length = 873
Score = 1310 bits (661), Expect = 0.0
Identities = 664/665 (99%)
Strand = Plus / Plus
Query: 1196 ccaaacacaatggtttaggtcaatgtccgaataaaagagcagatattgcgggtttgccag 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaacacaatggtttaggtcaatgtccgaataaaagagcagatattgcgggtttgccag 60
Query: 1256 ttgagaacgacattgatccatctgacttgatgactcaaatcctagcaattcaggagcaac 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagaacgacattgatccatctgacttgatgactcaaatcctagcaattcaggagcaac 120
Query: 1316 gtaaacaaaaagttgatcatgatgttgagcaagccaaggatcaagaaaacgacctgacca 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaaacaaaaagttgatcatgatgttgagcaagccaaggatcaagaaaacgacctgacca 180
Query: 1376 cccttgttgctgatggaactggcaagcaacatggagcccctgattttggagctactgata 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccttgttgctgatggaactggcaagcaacatggagcccctgattttggagctactgata 240
Query: 1436 tcagaaggttaactactaagctcactgatgctgagcaagagagggataagctggcagaga 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagaaggttaactactaagctcactgatgctgagcaagagagggataagctggcagaga 300
Query: 1496 aggtgggaattcttgaagaagaagttgtcagcttaaagactaagtgttctactgctgaag 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggtgggaattcttgaagaagaagttgtcagcttaaagactaagtgttctactgctgaag 360
Query: 1556 cttttgcgacctctgctgctgctgcttttgaagagaagaagaaggaagctgaaatcctcc 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttttgcgacctctgctgctgctgcttttgaagagaagaagaaggaagctgaaatcctcc 420
Query: 1616 ttgaaaagaatgaaagtgccgaaagttctctcgaggcaaagaagaaagaagttgataatc 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaaaagaatgaaagtgccgaaagttctctcgaggcaaagaagaaagaagttgataatc 480
Query: 1676 tcaaatctttacttcttagggcggcggaaggagcttttgacaatgcagtcaatcagctca 1735
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 tcaaatctttacttcttagggcggcggaaggaacttttgacaatgcagtcaatcagctca 540
Query: 1736 gaattcttaatcccggactcaatattgaaggagctgcttccaatagggttgctcgggaag 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaattcttaatcccggactcaatattgaaggagctgcttccaatagggttgctcgggaag 600
Query: 1796 gacaaatttgtcatgttaaggaaggaaaattcattccttgcccagatgtccatcctcctg 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacaaatttgtcatgttaaggaaggaaaattcattccttgcccagatgtccatcctcctg 660
Query: 1856 agtga 1860
|||||
Sbjct: 661 agtga 665
>gnl|LJGI|GO018471 similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 741
Score = 801 bits (404), Expect = 0.0
Identities = 425/428 (99%), Gaps = 3/428 (0%)
Strand = Plus / Plus
Query: 1 atggtcagaaagaagaacaaaatgaagaaggaagagattgctgaggattggtgttttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atggtcagaaagaagaacaaaatgaagaaggaagagattgctgaggattggtgttttgag 367
Query: 61 tgcatggatggaggcaagttgagggtgtgcgattataggggttgccttaaagcttatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgcatggatggaggcaagttgagggtgtgcgattataggggttgccttaaagcttatcat 427
Query: 121 cctgattgcgtgggaaaagatgattcttttttggaggataacagtcattggacttgccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctgattgcgtgggaaaagatgattcttttttggaggataacagtcattggacttgccgt 487
Query: 181 tcacatttttgccaccgttgtggtaaaacatctaagttttggtgtttatgctgcccaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcacatttttgccaccgttgtggtaaaacatctaagttttggtgtttatgctgcccaaat 547
Query: 241 gctgtttgtaggaactgcaccaatttgggtgaatttgctgttgtcaaagggaggaaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gctgtttgtaggaactgcaccaatttgggtgaatttgctgttgtcaaagggaggaaagga 607
Query: 301 ttttgcagacactgctcaaaacttgcctttctaattgaagaaaatgctggtgttgattct 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 608 ttttgcagacactgctcaaaacttgcctttct-attgaagaaaatgctggtgttgattct 666
Query: 361 gatggggaaaatgtagatttcaaagatcgagagacatatgaatgcttattctcagaatat 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 667 gatggggaaaatgtagatttc-aagatcgagagacatatgaatgcttattctcag-atat 724
Query: 421 tatgaaat 428
||||||||
Sbjct: 725 tatgaaat 732
Score = 67.9 bits (34), Expect = 2e-10
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 1 atggtcagaaagaagaacaaaatgaagaaggaagagattgctgaggattggtgttttgag 60
||||| |||| |||||||| || || ||||||| |||||||||||||||||||||||| |
Sbjct: 99 atggttagaacgaagaacagaaggaggaaggaaaagattgctgaggattggtgttttgtg 158
Query: 61 tgcatggatggaggcaagttgagggtgtgcgattatag 98
| || |||| |||| ||||||| |||||||||||
Sbjct: 159 tacaaggatagagggctcatgagggtctgcgattatag 196
>gnl|LJGI|AV775980 weakly similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 480
Score = 464 bits (234), Expect = e-129
Identities = 415/473 (87%), Gaps = 4/473 (0%)
Strand = Plus / Plus
Query: 113 cttatcatcctgattgcgtgggaaaagatgattcttttttggaggataacagtcattgga 172
||||||||||| |||||||||| | |||||| |||||||||||||| ||||| || |||
Sbjct: 9 cttatcatcctcgttgcgtgggatacgatgatacttttttggaggatgacagttat-gga 67
Query: 173 cttgccgttcacattttt-gccaccgttgtggtaaaacatctaagttttggtgtttatgc 231
|||| ||||||| || | | ||||||| ||||||||||| ||||| |||| ||||||
Sbjct: 68 cttgtggttcacagttgtcgtgaccgttgccgtaaaacatctcagtttaggtgcttatgc 127
Query: 232 tgcccaaatgctgtttgtaggaactgcaccaatttgggtgaatttgctgttgtcaaaggg 291
||||||| |||||||||| |||| |||| | |||| ||||||||||| || ||||||||
Sbjct: 128 tgcccaagtgctgtttgtgggaagtgcatctattttggtgaatttgccattatcaaaggg 187
Query: 292 aggaaaggattttgcagacactgctcaaaacttgcctttctaattgaagaaaatgctggt 351
| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| | |
Sbjct: 188 aagaaaggagtttgcagacactgctcaaaacttgcgtttctaattgaaggaaatgccgat 247
Query: 352 gttgattctgatggggaaaatgtagatttcaaagatcgagagacatatgaatgcttattc 411
|||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 248 gttgattctgatggtggaaatatagatttcaaagatcgagagacatatgaatgcttattt 307
Query: 412 tcagaatattatgaaattat-tnnnnnnnnngaagggctg-aattctcaacacgtacagt 469
||||||||||||||||||| ||||||||| ||||||||||| ||||| |
Sbjct: 308 gcagaatattatgaaattataaaaaaagagagaagggctgcaattctcaacatgtacact 367
Query: 470 ctgcccgtaacttcttgaagaatagcaaaaacaagagtgatttggatctagatgaaatag 529
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 368 ctgcccgtaacttcttgaagaatagcaaaaacaagagtgagttggatctagatgaaatag 427
Query: 530 ctgaagtggaaggtgatagtggagaatctgaagatgggagtgactttgaagtt 582
|||||| ||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 428 ctgaagaggaagatgatagtggagaatctgaagatggaagtgactttgaagtt 480
>gnl|LJGI|BP064218
Length = 451
Score = 75.8 bits (38), Expect = 9e-13
Identities = 189/223 (84%), Gaps = 16/223 (7%)
Strand = Plus / Minus
Query: 1654 aagaagaaagaa-gttgataatctca-aatctttacttcttaggg--cggcggaaggagc 1709
|||||||||||| |||||||||||| ||||||||||||||| || || ||||||||||
Sbjct: 392 aagaagaaagaatgttgataatctcccaatctttacttcttatggnccgccggaaggagc 333
Query: 1710 -ttttgac-aatgcagtcaatc-agctc-agaattcttaatccc--ggactcaatatt-g 1762
||||||| ||| || || ||| ||||| || |||||| ||||| |||||| ||||| |
Sbjct: 332 cttttgaccaatccactccatccagctccaggattctttatcccccggactccatatttg 273
Query: 1763 aaggagctgcttccaa--tagggttgct-cgggaaggacaaatttgt-catg-ttaagga 1817
|||||||||||||| | ||||||| || |||||||||| |||||| | || |||||||
Sbjct: 272 aaggagctgcttcccatttagggtttctccgggaaggacccatttgtgcctgtttaagga 213
Query: 1818 aggaaaattcattccttgcccagatgtccatcctcctgagtga 1860
|||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 212 aggaaaattccttccttgcccccatgtccctcctcctgagtga 170
>gnl|LJGI|TC74638 similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 614
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 97 aggggttgccttaaagcttatcatcctgattgcgtgggaaaag 139
|||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 334 agggattgtcttaaagcttatcatcctcattgcgtgggaaaag 376
Score = 56.0 bits (28), Expect = 8e-07
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 1 atggtcagaaagaagaacaaaatgaagaaggaagagatt---gctgaggattggtgtttt 57
|||||||||| ||||||||| | | ||||||||||| | |||||||||||||| |||
Sbjct: 117 atggtcagaacgaagaacaagagaaggaaggaagagaatatagctgaggattggtgcttt 176
Query: 58 gagtgcatggatggaggcaagttgagggtgtgcgattatagg 99
| |||| ||||||||| ||||||||||||||||||||
Sbjct: 177 gcttgcaaggatggagggctcatgagggtgtgcgattatagg 218