Miyakogusa Predicted Gene

Lj6g3v0365860.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0365860.1 tr|B9I119|B9I119_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_568469 PE=4 SV=1,48.7,8e-19,ZINC
FINGER (CCCH-TYPE) PROTEIN-LIKE (OS01G0884500 PROTEIN),NULL; GRB10
INTERACTING GYF PROTEIN,NULL,CUFF.57745.1
         (972 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76140 similar to UniRef100_A9TLH6 Cluster: Predicted ...   577   e-164

>gnl|LJGI|TC76140 similar to UniRef100_A9TLH6 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (30%)
          Length = 602

 Score =  577 bits (291), Expect = e-164
 Identities = 294/295 (99%)
 Strand = Plus / Plus

                                                                       
Query: 678 tgctgaaactattgatacaagtgtcaatgacaaacaagttaaaagtgcttcagctattgt 737
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgctgaaactattgatacaagtgtcaatgacaaacaagttaaaagtgcttcagctattgt 60

                                                                       
Query: 738 agtggagcagaaagttagcatttcaactgcagatgttatcgagttaagcgacagtgatga 797
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agtggagcagaaagttagcatttcaactgcagatgttatcgagttaagcgacagtgatga 120

                                                                       
Query: 798 agaggatgtaaatgttgcagatgcttcagcaggggaaaaaatggagagtcctgggatttc 857
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 agaggatgtaaatgttgcagatgcttcagcaggagaaaaaatggagagtcctgggatttc 180

                                                                       
Query: 858 tatttggcattgtttgggtccttctggtgaaaagagagggccctattcaatgtctgttct 917
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatttggcattgtttgggtccttctggtgaaaagagagggccctattcaatgtctgttct 240

                                                                  
Query: 918 caaatgttggagtgaatctgtcactcatcccataaaattcaaggtctggaagaca 972
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaatgttggagtgaatctgtcactcatcccataaaattcaaggtctggaagaca 295