Miyakogusa Predicted Gene
- Lj6g3v0352670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0352670.1 Non Chatacterized Hit- tr|I1LLY6|I1LLY6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44870
PE,83.6,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
Helicase_C,Helicase, C-terminal; DEAD-like he,CUFF.57722.1
(1641 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64465 similar to UniRef100_Q9LKL6 Cluster: DEAD box p... 1049 0.0
gnl|LJGI|TC68340 similar to UniRef100_Q9LKL6 Cluster: DEAD box p... 957 0.0
gnl|LJGI|TC68521 similar to UniRef100_A7P045 Cluster: Chromosome... 56 7e-07
>gnl|LJGI|TC64465 similar to UniRef100_Q9LKL6 Cluster: DEAD box protein P68; n=1;
Pisum sativum|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea), partial (31%)
Length = 837
Score = 1049 bits (529), Expect = 0.0
Identities = 529/529 (100%)
Strand = Plus / Plus
Query: 148 tcgtccctctccaatggccctcgccgcacctccgccctccctgatcctctcttccctctc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tcgtccctctccaatggccctcgccgcacctccgccctccctgatcctctcttccctctc 368
Query: 208 tggcaaccctccgaacgcgtttcccgcatgaatccccagcagattgaagaggtccgcata 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tggcaaccctccgaacgcgtttcccgcatgaatccccagcagattgaagaggtccgcata 428
Query: 268 cggcttaatcttgatgttactgctccatctggctctcctgatgctcctacacctatagaa 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cggcttaatcttgatgttactgctccatctggctctcctgatgctcctacacctatagaa 488
Query: 328 acgtttactgatatgtgtttgcacccaagtatcatgaaggatattgcttatcacgaatac 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acgtttactgatatgtgtttgcacccaagtatcatgaaggatattgcttatcacgaatac 548
Query: 388 accagaccaacttctattcaggcacaggccatgccgattgctcttagcggaagggatctg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 accagaccaacttctattcaggcacaggccatgccgattgctcttagcggaagggatctg 608
Query: 448 cttggttgtgctgaaactggtagcgggaagactgcagctttcacaattcctatgatacag 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cttggttgtgctgaaactggtagcgggaagactgcagctttcacaattcctatgatacag 668
Query: 508 cattgcttggcccaacctccaattcggcgcggtgatggtcccctggcattagttttggct 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cattgcttggcccaacctccaattcggcgcggtgatggtcccctggcattagttttggct 728
Query: 568 cctacaagagaacttgctcaacaaatagaaaaagaggttaaagctttcagcagatctctt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cctacaagagaacttgctcaacaaatagaaaaagaggttaaagctttcagcagatctctt 788
Query: 628 gagtcatttaaaactgctatagttgttggtggaactaacattgaaaagc 676
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gagtcatttaaaactgctatagttgttggtggaactaacattgaaaagc 837
Score = 77.8 bits (39), Expect = 2e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtatgtgcctccacacctgagaagcgcgacctca 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgtcgtatgtgcctccacacctgagaagcgcgacctca 200
>gnl|LJGI|TC68340 similar to UniRef100_Q9LKL6 Cluster: DEAD box protein P68; n=1; Pisum
sativum|Rep: DEAD box protein P68 - Pisum sativum (Garden
pea), partial (32%)
Length = 1136
Score = 957 bits (483), Expect = 0.0
Identities = 483/483 (100%)
Strand = Plus / Plus
Query: 1159 cgcactcagagtgaaagagaggctgccttgcgtgattttcggagtggctctaccagcatt 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cgcactcagagtgaaagagaggctgccttgcgtgattttcggagtggctctaccagcatt 226
Query: 1219 ttggttgccactgatgttgcatctcgtggactggatgtcacaggagtatcacatgtcatc 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ttggttgccactgatgttgcatctcgtggactggatgtcacaggagtatcacatgtcatc 286
Query: 1279 aatctagatcttccaaagaccatggaagattatgtacaccggattggaaggacggggcgt 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aatctagatcttccaaagaccatggaagattatgtacaccggattggaaggacggggcgt 346
Query: 1339 gcaggatcaaccggcctatctacctcattttatactgatcgtgacatgttccttgtggca 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcaggatcaaccggcctatctacctcattttatactgatcgtgacatgttccttgtggca 406
Query: 1399 aatataaagaaagcaatagctgatgctgaatctggaaatactgtggcatttgcaactgga 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aatataaagaaagcaatagctgatgctgaatctggaaatactgtggcatttgcaactgga 466
Query: 1459 aaggttgctagaagaaaggagaaagaagcagcagctgcacaaagagaggcaaatattgtt 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aaggttgctagaagaaaggagaaagaagcagcagctgcacaaagagaggcaaatattgtt 526
Query: 1519 ttatccaaacacattggatcgggagctgcttcagttaacattgaagataagttcaaattt 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttatccaaacacattggatcgggagctgcttcagttaacattgaagataagttcaaattt 586
Query: 1579 atgatgactgcctcaaacattaaaggagacggagcagcagatagtgcctgggatgattaa 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgatgactgcctcaaacattaaaggagacggagcagcagatagtgcctgggatgattaa 646
Query: 1639 tga 1641
|||
Sbjct: 647 tga 649
Score = 246 bits (124), Expect = 4e-64
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1034 taggtttgcttgtagaggaggcatcacaggctgaaaagtgtggtcatccattcccattaa 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 taggtttgcttgtagaggaggcatcacaggctgaaaagtgtggtcatccattcccattaa 74
Query: 1094 caattgtgtttgttgagagaaagacaaggtgtgatgatgtttctgaagcattggtagctc 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 caattgtgtttgttgagagaaagacaaggtgtgatgatgtttctgaagcattggtagctc 134
Query: 1154 aagg 1157
||||
Sbjct: 135 aagg 138
>gnl|LJGI|TC68521 similar to UniRef100_A7P045 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 1063
Score = 56.0 bits (28), Expect = 7e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1306 gattatgtacaccggattggaaggacggggcg 1337
|||||||||||||| |||||||||||||||||
Sbjct: 180 gattatgtacaccgtattggaaggacggggcg 211