Miyakogusa Predicted Gene

Lj6g3v0328460.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0328460.1 Non Chatacterized Hit- tr|F6HDU1|F6HDU1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.43,2e-16,seg,NULL,NODE_62634_length_1003_cov_60.294117.path2.1
         (936 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62176 similar to UniRef100_A7P4H8 Cluster: Chromosome...   900   0.0  

>gnl|LJGI|TC62176 similar to UniRef100_A7P4H8 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 1049

 Score =  900 bits (454), Expect = 0.0
 Identities = 467/471 (99%), Gaps = 4/471 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagaaggagacaggaggagcagggaagaaggaagcagcaggtacactctgcaaccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggaagaaggagacaggaggagcagggaagaaggaagcagcaggtacactctgcaaccc 177

                                                                       
Query: 61  tcacgaatctgcaacgaagacattctcttctgcatcgacatcgatcctcaatctctcgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tcacgaatctgcaacgaagacattctcttctgcatcgacatcgatcctcaatctctcgtc 237

                                                                       
Query: 121 gagatgaaaaccgccaccggacacaacggcagacccctcacccgcttggactccatcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gagatgaaaaccgccaccggacacaacggcagacccctcacccgcttggactccatcaag 297

                                                                       
Query: 181 caatccatccttctcttcgtccattccaagctcaccatcaaccccgatcaccgcttcgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caatccatccttctcttcgtccattccaagctcaccatcaaccccgatcaccgcttcgct 357

                                                                       
Query: 241 ttcgccactctctccaacaccgtctcatggctgaagaaagattttagcagtgatgttgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttcgccactctctccaacaccgtctcatggctgaagaaagattttagcagtgatgttgaa 417

                                                                       
Query: 301 tcaacaatggcagcaatgaggggtctttcagctaccaatatcagtacccaaccagacctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcaacaatggcagcaatgaggggtctttcagctaccaatatcagtacccaaccagacctc 477

                                                                       
Query: 361 accaatttgttcagacttgctgctcatgaagctaagaaatcgcgtgcccaaggtcgcatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 accaatttgttcagacttgctgctcatgaagctaagaaatcgcgtgcccaaggtcgcatt 537

                                                              
Query: 421 ttaagagtg----attctattctattgcagatcaaatgtgcgcccacagca 467
           |||||||||    ||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttaagagtggtaaattctattctattgcagatcaaatgtgcgcccacagca 588