Miyakogusa Predicted Gene
- Lj6g3v0291960.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0291960.2 tr|G7JAT1|G7JAT1_MEDTR Annotation was added to
scaffolds in November 2011 Long-chain-fatty-acid CoA
,78.46,0,AMP-binding,AMP-dependent synthetase/ligase; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY N,CUFF.57692.2
(1941 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80090 similar to UniRef100_O23268 Cluster: AMP-bindin... 862 0.0
gnl|LJGI|TC67949 similar to UniRef100_A7PZY2 Cluster: Chromosome... 460 e-128
gnl|LJGI|FS358162 similar to UniRef100_O23268 Cluster: AMP-bindi... 440 e-122
>gnl|LJGI|TC80090 similar to UniRef100_O23268 Cluster: AMP-binding protein; n=2;
Arabidopsis thaliana|Rep: AMP-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (12%)
Length = 485
Score = 862 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Plus
Query: 1 atggcagcgattcctatcagctccagcttcaactatgcttccactttctcctattcttct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggcagcgattcctatcacctccagcttcaactatgcttccactttctcctattcttct 106
Query: 61 gttcatgcccttcctcttttctttgctcgccacaacctgacccgggtcaaactttctcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gttcatgcccttcctcttttctttgctcgccacaacctgacccgggtcaaactttctcga 166
Query: 121 ccctgttctttccctgtgttttgcctatctgaatccaagacagagaaaacgcagataaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ccctgttctttccctgtgttttgcctatctgaatccaagacagagaaaacgcagataaga 226
Query: 181 aggttctccccttttctagaaagttcattgctttctggtaatgatgctgtggcctcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aggttctccccttttctagaaagttcattgctttctggtaatgatgctgtggcctcagat 286
Query: 241 gaatggaaaacagttcctgacatttggagatcttctgcccagaagtatggtgataaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gaatggaaaacagttcctgacatttggagatcttctgcccagaagtatggtgataaaata 346
Query: 301 gccttagtagatccatatcatgatcctccttcaactatgacatacaaacagctggaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gccttagtagatccatatcatgatcctccttcaactatgacatacaaacagctggaggac 406
Query: 361 gcaatattggacttttccgagggcttgagagttattggaataagacctgatgagaagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gcaatattggacttttccgagggcttgagagttattggaataagacctgatgagaagctt 466
Query: 421 gcgcttttcgctgataatt 439
|||||||||||||||||||
Sbjct: 467 gcgcttttcgctgataatt 485
>gnl|LJGI|TC67949 similar to UniRef100_A7PZY2 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 717
Score = 460 bits (232), Expect = e-128
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 1710 tgttcccttccattcaactgggcgtagtcgtaattctggtggtgtgattgttgtggatgg 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttcccttccattcaactgggcgtagtcgtaattctggtggtgtgattgttgtggatgg 60
Query: 1770 ccgtgctaaagacacgattgtgctttcaacaggtgaaaatgttgaaccgggagaactaga 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtgctaaagacacgattgtgctttcaacaggtgaaaatgttgaaccgggagaactaga 120
Query: 1830 agaagctgcaatgaggagtaacctcatacaacaaattgttgtcattggccaggataagcg 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaagctgcaatgaggagtaacctcatacaacaaattgttgtcattggccaggataagcg 180
Query: 1890 acgtctaggagctgtaattgttcctaacaaagaagaagtcttaaaggcagcg 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgtctaggagctgtaattgttcctaacaaagaagaagtcttaaaggcagcg 232
>gnl|LJGI|FS358162 similar to UniRef100_O23268 Cluster: AMP-binding protein; n=2;
Arabidopsis thaliana|Rep: AMP-binding protein -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 605
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Minus
Query: 546 ctctgaaagtgtgggactagctgtggacaaccccgaactgtttaatcggattgcaaaaca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctctgaaagtgtgggactagctgtggacaaccccgaactgtttaatcggattgcaaaaca 546
Query: 606 gttttatttgaaggcttccatgagatatattattttactttggggagaaaaatcaagcct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gttttatttgaaggcttccatgagatatattattttactttggggagaaaaatcaagcct 486
Query: 666 gatcagagaagtagagaaagaggtgccagtctttactttcatggaagtcatacatttggg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gatcagagaagtagagaaagaggtgccagtctttactttcatggaagtcatacatttggg 426
Query: 726 acgagagagtcgcaaggcattgtttggttctcatgatgctcg 767
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acgagagagtcgcaaggcattgtttggttctcatgatgctcg 384