Miyakogusa Predicted Gene

Lj6g3v0227590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0227590.1 Non Chatacterized Hit- tr|I1JDK6|I1JDK6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56764 PE,87.35,0,LUNG
SEVEN TRANSMEMBRANE RECEPTOR,NULL; LUNG SEVEN TRANSMEMBRANE
RECEPTOR,Transmembrane receptor, eu,CUFF.57698.1
         (1229 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66486 homologue to UniRef100_A7PSV8 Cluster: Chromoso...    52   8e-06

>gnl|LJGI|TC66486 homologue to UniRef100_A7PSV8 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 826

 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                       
Query: 793 ggaactggatggtcttttctcaaaccctttcttcaggataaggagaagaaggttctcatg 852
           |||||||| |||||||| ||||| || ||  | ||||| | ||||||||||||  | |||
Sbjct: 3   ggaactgggtggtctttcctcaagccattcttgcaggacagggagaagaaggtgttgatg 62

                                     
Query: 853 attgtgattccgcttcaggttgttgc 878
           || ||||| |||||||||||| ||||
Sbjct: 63  atcgtgatcccgcttcaggttcttgc 88