Miyakogusa Predicted Gene
- Lj6g3v0227320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0227320.1 Non Chatacterized Hit- tr|F6HKT0|F6HKT0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.51,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PROTEIN_KINASE_DOM,Protein kinase, catalytic domain,CUFF.57636.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS350626 weakly similar to UniRef100_A7PP31 Cluster: Ch... 287 4e-77
gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os... 165 4e-40
gnl|LJGI|BP055282 weakly similar to UniRef100_Q0JEP0 Cluster: Os... 149 2e-35
gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Ri... 139 2e-32
gnl|LJGI|FS352914 weakly similar to UniRef100_UPI0000048B80 Clus... 109 2e-23
gnl|LJGI|FS351385 weakly similar to UniRef100_A7QQU5 Cluster: Ch... 78 7e-14
>gnl|LJGI|FS350626 weakly similar to UniRef100_A7PP31 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 630
Score = 287 bits (145), Expect = 4e-77
Identities = 247/281 (87%)
Strand = Plus / Minus
Query: 261 gcaaactagtacaattggaataaaggggactattggttatgctccaccagagtatggagt 320
||||| |||||| || |||||||| || ||| || | |||||| | ||||||||||||||
Sbjct: 625 gcaaagtagtacgatcggaataaaaggaactcttagctatgctgctccagagtatggagt 566
Query: 321 gggttctgaagtgtccacatatggcgacatttatagcttcagaattcttgtattggaaat 380
|||||||||||||||||||| ||||||||| ||||||||| | || ||||||||||||||
Sbjct: 565 gggttctgaagtgtccacatgtggcgacatatatagcttcgggatccttgtattggaaat 506
Query: 381 gcttaccggaaaaagacctacagatgaattgtttgaagacggtcaaaatctgcataagtt 440
|||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 505 gcttactggaagaagacctacagatgaattgtttgaaggcggccaaaatctgcataagtt 446
Query: 441 tgtggaaatttcatttcctaaaaatcttttacaaattttggacccacaacttgtatcaag 500
||||| ||||||| || || | ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 445 tgtggcaatttcactttctgataatcttttacagattttagacccacatcttgtatcaag 386
Query: 501 agatgaagaagcaacagttggagaaaatagatggaatctta 541
|| ||||||||||| || |||||||| ||| |||| ||||
Sbjct: 385 agttgaagaagcaatagaaggagaaaacagagggaacctta 345
>gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os04g0227000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0227000
protein - Oryza sativa subsp. japonica (Rice), partial
(7%)
Length = 381
Score = 165 bits (83), Expect = 4e-40
Identities = 119/131 (90%)
Strand = Plus / Minus
Query: 329 aagtgtccacatatggcgacatttatagcttcagaattcttgtattggaaatgcttaccg 388
||||||||||| |||||||||| ||||||||| | |||||||| ||||||||||||||||
Sbjct: 381 aagtgtccacacatggcgacatgtatagcttcgggattcttgtgttggaaatgcttaccg 322
Query: 389 gaaaaagacctacagatgaattgtttgaagacggtcaaaatctgcataagtttgtggaaa 448
||| ||| || ||||||||| |||| |||||||||||||||||||| |||||||| ||||
Sbjct: 321 gaagaaggcccacagatgaaatgttcgaagacggtcaaaatctgcacaagtttgttgaaa 262
Query: 449 tttcatttcct 459
|||||||||||
Sbjct: 261 tttcatttcct 251
>gnl|LJGI|BP055282 weakly similar to UniRef100_Q0JEP0 Cluster: Os04g0227000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0227000
protein - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 482
Score = 149 bits (75), Expect = 2e-35
Identities = 141/163 (86%)
Strand = Plus / Minus
Query: 349 atttatagcttcagaattcttgtattggaaatgcttaccggaaaaagacctacagatgaa 408
|||||||||||| | ||||| |||||||||||||||||||| |||| ||||| |||||
Sbjct: 475 atttatagcttcgggattctagtattggaaatgcttaccgggaaaaagcctaccgatgag 416
Query: 409 ttgtttgaagacggtcaaaatctgcataagtttgtggaaatttcatttcctaaaaatctt 468
|||||||||||||||| ||||||||||||||||||| | |||||||||| | || | |
Sbjct: 415 ttgtttgaagacggtcccaatctgcataagtttgtggggaattcatttcctgataaccct 356
Query: 469 ttacaaattttggacccacaacttgtatcaagagatgaagaag 511
|||| ||||||||||||| ||||||| ||||||||||||||
Sbjct: 355 gtacatattttggacccacctcttgtattaagagatgaagaag 313
>gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Rich Repeat family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Leucine Rich Repeat family protein, expressed
- Oryza sativa subsp. japonica (Rice), partial (11%)
Length = 502
Score = 139 bits (70), Expect = 2e-32
Identities = 142/166 (85%)
Strand = Plus / Plus
Query: 5 aaaatggaagcttagaacagtggcttcatcccgggagtggaggtgtagagctttttgagc 64
|||||||||| |||||||||||||||||||| |||| ||| ||||||||||| ||| |
Sbjct: 326 aaaatggaagtttagaacagtggcttcatccaaggaggggaagtgtagagcttcatgaac 385
Query: 65 ctccggatcttcaacaaagattaagtatcattattgatgttgcttctgcattaaattatc 124
| | ||| ||| ||||||||||||||||||| ||||||||||||| ||| ||| ||||||
Sbjct: 386 cactggaccttgaacaaagattaagtatcatcattgatgttgcttatgctttacattatc 445
Query: 125 ttcatcatgagtgtgagccattggtccttcactgtgatctaaagcc 170
| ||||| || ||||||| |||||||||| |||||| |||||||
Sbjct: 446 tgcatcaagaatgtgagcaggtggtccttcattgtgatataaagcc 491
>gnl|LJGI|FS352914 weakly similar to UniRef100_UPI0000048B80 Cluster: EFR (EF-TU
RECEPTOR); ATP binding / kinase/ protein
serine/threonine kinase; n=1; Arabidopsis thaliana|Rep:
EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein
serine/threonine kinase - Arabidopsis thaliana, partial
(8%)
Length = 738
Score = 109 bits (55), Expect = 2e-23
Identities = 136/163 (83%)
Strand = Plus / Minus
Query: 275 ttggaataaaggggactattggttatgctccaccagagtatggagtgggttctgaagtgt 334
||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| || |
Sbjct: 651 ttggaataaaggggactgttggttatgctcctccagagtatggaatgggttctgaggttt 592
Query: 335 ccacatatggcgacatttatagcttcagaattcttgtattggaaatgcttaccggaaaaa 394
| | | || ||||| |||||||| ||||||| || || |||||| | || |||| |
Sbjct: 591 caattgaaggtgacatgtatagctttggaattctagttttagaaatgttaactggaagga 532
Query: 395 gacctacagatgaattgtttgaagacggtcaaaatctgcataa 437
|||| ||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 531 gacccacagatgaaatgtttgaagatggtcataatctccataa 489
>gnl|LJGI|FS351385 weakly similar to UniRef100_A7QQU5 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 666
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 432 gcataagtttgtggaaatttcatttcctaaaaatcttttacaaattttggacccacaact 491
|||||||||||| | ||||||||||||| | ||||||||||| ||||| ||||||| ||
Sbjct: 666 gcataagtttgttggaatttcatttcctgataatcttttacagattttagacccacctct 607
Query: 492 tgtatcaagagatga 506
|||| ||||||||||
Sbjct: 606 tgtaccaagagatga 592