Miyakogusa Predicted Gene

Lj6g3v0157220.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0157220.1 Non Chatacterized Hit- tr|K3YS61|K3YS61_SETIT
Uncharacterized protein OS=Setaria italica GN=Si017105,29.68,5e-19,no
description,WD40/YVTN repeat-like-containing domain; WD40,WD40 repeat;
WD_REPEATS_2,WD40 repeat; ,gene.g63899.t1.1
         (705 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosom...   323   8e-88
gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome...   256   2e-67
gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome...   198   3e-50

>gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 825

 Score =  323 bits (163), Expect = 8e-88
 Identities = 289/331 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   tagttttcaggggaagtccaaaatcaagtaggaaatctattcgtcacattgatcagatac 64
           |||||||||| |||||| | ||||||| ||  ||||||||||||||||| |||||| | |
Sbjct: 494 tagttttcagaggaagttctaaatcaactacaaaatctattcgtcacatcgatcaggtgc 553

                                                                       
Query: 65  gagaagcagatgcagccgcgcttcaaaacaataggaatcagccccgccctcgtgaaatgc 124
           || ||||||| |||||||| |||||||||| ||  ||||||||||||||||||  |||||
Sbjct: 554 gacaagcagacgcagccgcacttcaaaacagtatcaatcagccccgccctcgtacaatgc 613

                                                                       
Query: 125 ctaagaaagaagcaaaggccttggatgcaccaaatattagaaatgactactattcaaaca 184
           |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctaagaaagaggccaaggtcttggatgcaccaaatattagaaatgactactattcaaaca 673

                                                                       
Query: 185 ttatggattgggggaaaaacaacattctagcagttgctttgggctcagaaatgtaccttt 244
            ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 674 ctatggattgggggaaaaacaacattcttgctgttgctttgggatcagaaatgtaccttt 733

                                                                       
Query: 245 ggaactccgtaagcaatgacgtaattacgttgttcaaagccactggcaatgactttccga 304
           ||||||| || | |||  | |||  || ||||||  ||||||||  |||||| | ||| |
Sbjct: 734 ggaactctgtgaacaacaatgtacataggttgtttgaagccactcacaatgattgtccca 793

                                          
Query: 305 ctagtgttgcctggtcacaggatgccaaact 335
           | |||||||||||||||| ||||||||||||
Sbjct: 794 caagtgttgcctggtcacgggatgccaaact 824


>gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 787

 Score =  256 bits (129), Expect = 2e-67
 Identities = 234/269 (86%)
 Strand = Plus / Plus

                                                                       
Query: 128 agaaagaagcaaaggccttggatgcaccaaatattagaaatgactactattcaaacatta 187
           ||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 372 agaaagaggccaaggtcttggatgcaccaaatattagaaatgactactattcaaacacta 431

                                                                       
Query: 188 tggattgggggaaaaacaacattctagcagttgctttgggctcagaaatgtacctttgga 247
           ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 432 tggattgggggaaaaacaacattcttgctgttgctttgggatcagaaatgtacctttgga 491

                                                                       
Query: 248 actccgtaagcaatgacgtaattacgttgttcaaagccactggcaatgactttccgacta 307
           |||| || | |||  | |||  || ||||||  ||||||||  |||||| | ||| || |
Sbjct: 492 actctgtgaacaacaatgtacataggttgtttgaagccactcacaatgattgtcccacaa 551

                                                                       
Query: 308 gtgttgcctggtcacaggatgccaaactagttgcgataggatctaggcgctctaaacttc 367
           ||||||||||||||| ||||||||||||  | ||   ||||| || || |||||| ||||
Sbjct: 552 gtgttgcctggtcacgggatgccaaacttttcgcagcaggatttatgcactctaagcttc 611

                                        
Query: 368 aactctgggatgctgagacttctaagcca 396
           |||||||||||||||||||||||||||||
Sbjct: 612 aactctgggatgctgagacttctaagcca 640


>gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 629

 Score =  198 bits (100), Expect = 3e-50
 Identities = 135/146 (92%), Gaps = 3/146 (2%)
 Strand = Plus / Plus

                                                                       
Query: 558 gagcccagatgggttaacagtggtgtccgctggggcagatgaatctcttcgcttttggga 617
           ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1   gagcccagatgggttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 60

                                                                       
Query: 618 tgtgtttgggccacctgctactgatgatacatcaaagatctcatatctggataacctctt 677
           | | |||||||||||||||||   ||||||||||||||||||| ||||||||||||| ||
Sbjct: 61  tatttttgggccacctgctac---tgatacatcaaagatctcacatctggataacctttt 117

                                     
Query: 678 gtctctgaagatatccccattaagat 703
           ||| |||||||||||| |||||||||
Sbjct: 118 gtccctgaagatatccgcattaagat 143