Miyakogusa Predicted Gene

Lj6g3v0156180.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0156180.2 Non Chatacterized Hit- tr|I1JDJ8|I1JDJ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.33,3e-19,WD40,WD40
repeat; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; WD_REPE,CUFF.57567.2
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome...   280   3e-75

>gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 629

 Score =  280 bits (141), Expect = 3e-75
 Identities = 144/145 (99%)
 Strand = Plus / Plus

                                                                       
Query: 57  gagcccagatggtttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 116
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagcccagatgggttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 60

                                                                       
Query: 117 tatttttgggccacctgctactgatacatcaaagatctcacatctggataaccttttgtc 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatttttgggccacctgctactgatacatcaaagatctcacatctggataaccttttgtc 120

                                    
Query: 177 cctgaagatatccgcattaagataa 201
           |||||||||||||||||||||||||
Sbjct: 121 cctgaagatatccgcattaagataa 145