Miyakogusa Predicted Gene

Lj6g3v0143860.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0143860.1 tr|F4I5S3|F4I5S3_ARATH Chromosome transmission
fidelity protein 18 OS=Arabidopsis thaliana GN=CTF18 ,57.19,0,no
description,NULL; seg,NULL; CTF18, CHROMOSOME TRANSMISSION FIDELITY
FACTOR 18 HOMOLOG,NULL; HOLLI,CUFF.57527.1
         (1743 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66064 similar to UniRef100_A7R3E6 Cluster: Chromosome...   507   e-143

>gnl|LJGI|TC66064 similar to UniRef100_A7R3E6 Cluster: Chromosome undetermined
            scaffold_514, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_514, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (31%)
          Length = 791

 Score =  507 bits (256), Expect = e-143
 Identities = 259/260 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1484 actcgaatcccaatggaagtgcaaatgcaacagacaaagcgaaactgcttaagatgggaa 1543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    actcgaatcccaatggaagtgcaaatgcaacagacaaagcgaaactgcttaagatgggaa 61

                                                                        
Query: 1544 aattgaagaaaccatccagtagttcaagtttctttgacaggtttaaaaagttgaatgtca 1603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   aattgaagaaaccatccagtagttcaagtttctttgacaggtttaaaaagttgaatgtca 121

                                                                        
Query: 1604 agggtctccaaaatgatagatctcaacagaaagaagctactttggagaaacatcgatgcc 1663
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  agggtctcccaaatgatagatctcaacagaaagaagctactttggagaaacatcgatgcc 181

                                                                        
Query: 1664 ctttactttttaaatttaatgagggttttactaatgctgtcaaaaggcctgttcgaatgc 1723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  ctttactttttaaatttaatgagggttttactaatgctgtcaaaaggcctgttcgaatgc 241

                                
Query: 1724 gtgaatttctttcctaatta 1743
            ||||||||||||||||||||
Sbjct: 242  gtgaatttctttcctaatta 261