Miyakogusa Predicted Gene
- Lj6g3v0109720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0109720.1 Non Chatacterized Hit- tr|I1NEH6|I1NEH6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1382
PE=,92.99,0,POTASSIUM CHANNEL BETA,Potassium channel,
voltage-dependent, beta subunit, KCNAB-related; ALDO/KETO
,CUFF.57517.1
(1158 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72192 homologue to UniRef100_A7NXT0 Cluster: Chromoso... 1974 0.0
gnl|LJGI|BI420900 homologue to UniRef100_A7NXT0 Cluster: Chromos... 858 0.0
gnl|LJGI|BW609664 homologue to UniRef100_A7NXT0 Cluster: Chromos... 854 0.0
>gnl|LJGI|TC72192 homologue to UniRef100_A7NXT0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), complete
Length = 1427
Score = 1974 bits (996), Expect = 0.0
Identities = 1046/1070 (97%)
Strand = Plus / Plus
Query: 89 aaagattccatcatttctcatttctctctttatcactacaaacagaaagtatcaatcggn 148
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aaagattccatcatttctcatttctctctttatcactacaaacagaaagtatcaatcgga 72
Query: 149 nnnnnnnnnnnnnnnnnnnnntgcagtacaagaacctcgggcgatcaggcctaaaggtaa 208
|||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gaaagaagaagaagaagaagatgcagtacaagaacctcgggcgatcaggcctaaaggtaa 132
Query: 209 gccagctatcctacggcgcatgggtgagtttcggcaaccagctcgacgtcaaagaagcca 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gccagctatcctacggcgcatgggtgagtttcggcaaccagctcgacgtcaaagaagcca 192
Query: 269 aatccctcctccaatgctgccgcgaccacggcgtcaacttcttcgacaacgccgaagtct 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aatccctcctccaatgctgccgcgaccacggcgtcaacttcttcgacaacgccgaagtct 252
Query: 329 acgccaacggccgcgccgaggagatcatgggtcaagccatccgcgagctcggatggaagc 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acgccaacggccgcgccgaggagatcatgggtcaagccatccgcgagctcggatggaagc 312
Query: 389 gctctgacatcgtcgtctccaccaagatcttctggggtggtcaaggtcccaacgacaagg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gctctgacatcgtcgtctccaccaagatcttctggggtggtcaaggtcccaacgacaagg 372
Query: 449 gtctctctcgcaagcacatcgttgaaggcactcgcgcttcgctcaagaggcttgacatgg 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtctctctcgcaagcacatcgttgaaggcactcgcgcttcgctcaagaggcttgacatgg 432
Query: 509 agtatgttgatgttatctattgtcatcgccctgatacttctactccgattgaggaaactg 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agtatgttgatgttatctattgtcatcgccctgatacttctactccgattgaggaaactg 492
Query: 569 ttagggctatgaactttgttattgatcagggttgggctttctattgggggactagtgagt 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttagggctatgaactttgttattgatcagggttgggctttctattgggggactagtgagt 552
Query: 629 ggtccgcgcagcagatcactgaggcgtgggccgtcgcgcatcgccttgatcttgttgggc 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggtccgcgcagcagatcactgaggcgtgggccgtcgcgcatcgccttgatcttgttgggc 612
Query: 689 ctattgtggagcagcctgagtacaatctcttgtccaggcacaaggttgaagctgagtatc 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctattgtggagcagcctgagtacaatctcttgtccaggcacaaggttgaagctgagtatc 672
Query: 749 tgccactgtattctagttatgggattggactcactacttggagtccacttgcatctggag 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgccactgtattctagttatgggattggactcactacttggagtccacttgcatctggag 732
Query: 809 ttctcactggcaaatacaagaaaggagctattccgtctgatagccgttttgctttggaga 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ttctcactggcaaatacaagaaaggagctattccgtctgatagccgttttgctttggaga 792
Query: 869 attacaaaaacctggcagctcgttcattggttgacgatgtgctaaaaaaggttgatggtt 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 attacaaaaacctggcagctcgttcattggttgacgatgtgctaaaaaaggttgatggtt 852
Query: 929 taaagccaatagcagatgaactgggtgtgccattagcacaacttgcaattgcatggtgtg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 taaagccaatagcagatgaactgggtgtgccattagcacaacttgcaattgcatggtgtg 912
Query: 989 ctaataatcccaatgtctcgtcagttatctgtggcgctacaaaggagtctcagattcaag 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ctaataatcccaatgtctcgtcagttatctgtggcgctacaaaggagtctcagattcaag 972
Query: 1049 agaacatgaaagcaattgatgtcattccattactgactcctgctgtgatggagaagattg 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 agaacatgaaagcaattgatgtcattccattactgactcctgctgtgatggagaagattg 1032
Query: 1109 agaatgttgttcaaagaaagccaaagcgccctgattcatatagatgaatt 1158
|||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1033 agaatgttgttcaaagcaagcccaagcgccctgattcatatagatgaatt 1082
>gnl|LJGI|BI420900 homologue to UniRef100_A7NXT0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 491
Score = 858 bits (433), Expect = 0.0
Identities = 436/437 (99%)
Strand = Plus / Plus
Query: 414 gatcttctggggtggtcaaggtcccaacgacaagggtctctctcgcaagcacatcgttga 473
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gatctcctggggtggtcaaggtcccaacgacaagggtctctctcgcaagcacatcgttga 114
Query: 474 aggcactcgcgcttcgctcaagaggcttgacatggagtatgttgatgttatctattgtca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 aggcactcgcgcttcgctcaagaggcttgacatggagtatgttgatgttatctattgtca 174
Query: 534 tcgccctgatacttctactccgattgaggaaactgttagggctatgaactttgttattga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tcgccctgatacttctactccgattgaggaaactgttagggctatgaactttgttattga 234
Query: 594 tcagggttgggctttctattgggggactagtgagtggtccgcgcagcagatcactgaggc 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tcagggttgggctttctattgggggactagtgagtggtccgcgcagcagatcactgaggc 294
Query: 654 gtgggccgtcgcgcatcgccttgatcttgttgggcctattgtggagcagcctgagtacaa 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtgggccgtcgcgcatcgccttgatcttgttgggcctattgtggagcagcctgagtacaa 354
Query: 714 tctcttgtccaggcacaaggttgaagctgagtatctgccactgtattctagttatgggat 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tctcttgtccaggcacaaggttgaagctgagtatctgccactgtattctagttatgggat 414
Query: 774 tggactcactacttggagtccacttgcatctggagttctcactggcaaatacaagaaagg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tggactcactacttggagtccacttgcatctggagttctcactggcaaatacaagaaagg 474
Query: 834 agctattccgtctgata 850
|||||||||||||||||
Sbjct: 475 agctattccgtctgata 491
Score = 123 bits (62), Expect = 3e-27
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 347 aggagatcatgggtcaagccatccgcgagctcggatggaagcgctctgacatcgtcgtct 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aggagatcatgggtcaagccatccgcgagctcggatggaagcgctctgacatcgtcgtct 3
Query: 407 cc 408
||
Sbjct: 2 cc 1
>gnl|LJGI|BW609664 homologue to UniRef100_A7NXT0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 510
Score = 854 bits (431), Expect = 0.0
Identities = 431/431 (100%)
Strand = Plus / Plus
Query: 174 gtacaagaacctcgggcgatcaggcctaaaggtaagccagctatcctacggcgcatgggt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gtacaagaacctcgggcgatcaggcctaaaggtaagccagctatcctacggcgcatgggt 139
Query: 234 gagtttcggcaaccagctcgacgtcaaagaagccaaatccctcctccaatgctgccgcga 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagtttcggcaaccagctcgacgtcaaagaagccaaatccctcctccaatgctgccgcga 199
Query: 294 ccacggcgtcaacttcttcgacaacgccgaagtctacgccaacggccgcgccgaggagat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ccacggcgtcaacttcttcgacaacgccgaagtctacgccaacggccgcgccgaggagat 259
Query: 354 catgggtcaagccatccgcgagctcggatggaagcgctctgacatcgtcgtctccaccaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 catgggtcaagccatccgcgagctcggatggaagcgctctgacatcgtcgtctccaccaa 319
Query: 414 gatcttctggggtggtcaaggtcccaacgacaagggtctctctcgcaagcacatcgttga 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatcttctggggtggtcaaggtcccaacgacaagggtctctctcgcaagcacatcgttga 379
Query: 474 aggcactcgcgcttcgctcaagaggcttgacatggagtatgttgatgttatctattgtca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggcactcgcgcttcgctcaagaggcttgacatggagtatgttgatgttatctattgtca 439
Query: 534 tcgccctgatacttctactccgattgaggaaactgttagggctatgaactttgttattga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcgccctgatacttctactccgattgaggaaactgttagggctatgaactttgttattga 499
Query: 594 tcagggttggg 604
|||||||||||
Sbjct: 500 tcagggttggg 510