Miyakogusa Predicted Gene
- Lj6g3v0086460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0086460.1 Non Chatacterized Hit- tr|I1LAP5|I1LAP5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19620
PE,85.2,0,seg,NULL; NTF2,Nuclear transport factor 2; RRM_6,NULL;
NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROT,CUFF.57493.1
(1416 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79596 similar to UniRef100_A7NXI7 Cluster: Chromosome... 2139 0.0
gnl|LJGI|TC76588 similar to UniRef100_A7NXI7 Cluster: Chromosome... 1403 0.0
gnl|LJGI|DC599622 similar to UniRef100_Q7SCL1 Cluster: GPI-ancho... 74 3e-12
gnl|LJGI|TC80427 similar to UniRef100_A7NXI7 Cluster: Chromosome... 74 3e-12
gnl|LJGI|TC75809 similar to UniRef100_A7NXI7 Cluster: Chromosome... 74 3e-12
gnl|LJGI|TC66381 74 3e-12
>gnl|LJGI|TC79596 similar to UniRef100_A7NXI7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (74%)
Length = 1444
Score = 2139 bits (1079), Expect = 0.0
Identities = 1109/1120 (99%), Gaps = 1/1120 (0%)
Strand = Plus / Plus
Query: 1 atggctacgccgtttcccattcccctcactgcagctcaggttgggacttacttcgttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 atggctacgccgtttcccattcccctcactgcagctcaggttgggacttacttcgttggc 156
Query: 61 cagtactaccatgtgcttcagaatcaaccagagttcgttcaccagttctactctgatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 cagtactaccatgtgcttcagaatcaaccagagttcgttcaccagttctactctgatgcc 216
Query: 121 agcaccatgctccgcatcgatggcagcgccagagacactgccaccgcaatgctgcaaaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 217 agcaccatgctccgcatcgatggcagcgccagagacactgccaccgcaatgctgcaaatt 276
Query: 181 catgcactggttacgtcacttagttatactggaattgaaatcaagaccgcacaatctctg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 catgcactggttatgtcacttagttatactggaattgaaatcaagaccgcacaatctctg 336
Query: 241 gaatcttggagtggtggtgttcttgtgatggtttccggatctgtgcaaattaaggactac 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaatcttggggtggtggtgttcttgtgatggtttccggatctgtgcaaattaaggactac 396
Query: 301 aaccagaggaggaaatttatgcagacattcttccttgcgccccaagaaaaaggnnnnnnn 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaccagaggaggaaatttatgcagacattcttccttgcgccccaagaaaaaggttttttt 456
Query: 361 gtgcttaatgatatttttcactttgttgaagaggatcactttccccaccaccaagcagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtgcttaatgatatttttcactttgttgaagaggatcactttccccaccaccaagcagtc 516
Query: 421 tttttagctcagagcaatcttgattccaaactgaatgctccgagtacaattaatgagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tttttagctcagagcaatcttgattccaaactgaatgctccgagtacaattaatgagcca 576
Query: 481 gtatccaactatctgcttggggaagatatccaggctcgggagtttgctgctacaaatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtatccaactatctgcttggggaagatatccaggctcgggagtttgctgctacaaatgag 636
Query: 541 gtcaaagaaaatgg-tgtagttggtaattatggattttcagagcaaggaatgcagcgagg 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gtcaaagaaaatgggtgtagttggtaattatggattttcagagcaaggaatgcagcgagg 696
Query: 600 ccctgattctgaacatattagggaggataatgctgttgaagagtcaattggtttgcttca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ccctgattctgaacatattagggaggataatgctgttgaagagtcaattggtttgcttca 756
Query: 660 atcctcagggaatccagtgcaagaccatgcacctgcatctcctgaggaatctgccgggga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 atcctcagggaatccagtgcaagaccatgcacctgcatctcctgaggaatctgccgggga 816
Query: 720 gccacaaaagcacacttatgcctccatattacgggttgcgaaaggacaatctacaccatc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gccacaaaagcacacttatgcctccatattacgggttgcgaaaggacaatctacaccatc 876
Query: 780 tgcggcttctcagccttctcataagcatgtgtcctcttcagaatgggatcctgctcccca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 tgcggcttctcagccttctcataagcatgtgtcctcttcagaatgggatcctgctcccca 936
Query: 840 gagtagcagtcagcaaactactgcttcagcaaatgcatttgaaaggtctgaaactgaggg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 gagtagcagtcagcaaactactgcttcagcaaatgcatttgaaaggtctgaaactgaggg 996
Query: 900 agtggaggagcttcctgcaacagaagatgaagatgaaatcaaatcggtttacgtgagaaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 agtggaggagcttcctgcaacagaagatgaagatgaaatcaaatcggtttacgtgagaaa 1056
Query: 960 tttgtcacctacggtgtctccttctgaagttgaagaggaattcaagaattttggtagaat 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 tttgtcacctacggtgtctccttctgaagttgaagaggaattcaagaattttggtagaat 1116
Query: 1020 cagacctgatggtgttgtcataagaagtcgtaaggacgttggtgtttgttatgcatttgt 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 cagacctgatggtgttgtcataagaagtcgtaaggacgttggtgtttgttatgcatttgt 1176
Query: 1080 tgaattcgaagatatgtcaggagttcataatgcagtccag 1119
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 tgaattcgaagatatgtcaggagttcataatgcagtccag 1216
Score = 402 bits (203), Expect = e-111
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 1117 caggcaggatctgttcagattgcgggaagacaagcatacattgaagagcggagaccaaac 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 caggcaggatctgttcagattgcgggaagacaagcatacattgaagagcggagaccaaac 1301
Query: 1177 agtaacattccttctcgaggaggaagacggggtagaggcaggggaggctatcaatcagag 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 agtaacattccttctcgaggaggaagacggggtagaggcaggggaggctatcaatcagag 1361
Query: 1237 gcaccaagaggtcgttttggttctaggagctatggcaggggaagtggccaagatggtggt 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 gcaccaagaggtcgttttggttctaggagctatggcaggggaagtggccaagatggtggt 1421
Query: 1297 gatcgtgagtataccaagtcgag 1319
|||||||||||||||||||||||
Sbjct: 1422 gatcgtgagtataccaagtcgag 1444
>gnl|LJGI|TC76588 similar to UniRef100_A7NXI7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (36%)
Length = 1015
Score = 1403 bits (708), Expect = 0.0
Identities = 738/744 (99%), Gaps = 3/744 (0%)
Strand = Plus / Plus
Query: 673 ccagtgcaagaccatgcacctgcatctcctgaggaatctgccggggagccacaaaagcac 732
||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 1 ccagtgcaagaccatgcac-tgcatctc-tgagga-tctgccggggagccacaaaagcac 57
Query: 733 acttatgcctccatattacgggttgcgaaaggacaatctacaccatctgcggcttctcag 792
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gcttatgcctccatattacgggttgcgaaaggacaatctacaccatctgcggcttctcag 117
Query: 793 ccttctcataagcatgtgtcctcttcagaatgggatcctgctccccagagtagcagtcag 852
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ccttctcataagcatgcgtcctcttcagaatgggatcctgctccccagagtagcagtcag 177
Query: 853 caaactactgcttcagcaaatgcatttgaaaggtctgaaactgagggagtggaggagctt 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 caaactactgcttcagcaaatgcatttgaaaggtctgaaactgagggagtggaggagctt 237
Query: 913 cctgcaacagaagatgaagatgaaatcaaatcggtttacgtgagaaatttgtcacctacg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cctgcaacagaagatgaagatgaaatcaaatcggtttacgtgagaaatttgtcacctacg 297
Query: 973 gtgtctccttctgaagttgaagaggaattcaagaattttggtagaatcagacctgatggt 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtgtctccttctgaagttgaagaggaattcaagaattttggtagaatcagacctgatggt 357
Query: 1033 gttgtcataagaagtcgtaaggacgttggtgtttgttatgcatttgttgaattcgaagat 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttgtcataagaagtcgtaaggacgttggtgtttgttatgcatttgttgaattcgaagat 417
Query: 1093 atgtcaggagttcataatgcagtccaggcaggatctgttcagattgcgggaagacaagca 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgtcaggagttcataatgcagtccaggcaggatctgttcagattgcgggaagacaagca 477
Query: 1153 tacattgaagagcggagaccaaacagtaacattccttctcgaggaggaagacggggtaga 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tacattgaagagcggagaccaaacagtaacattccttctcgaggaggaagacggggtaga 537
Query: 1213 ggcaggggaggctatcaatcagaggcaccaagaggtcgttttggttctaggagctatggc 1272
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggcagggggggctatcaatcagaggcaccaagaggtcgttttggttctaggagctatggc 597
Query: 1273 aggggaagtggccaagatggtggtgatcgtgagtataccaagtcgagaggaaatggtttc 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aggggaagtggccaagatggtggtgatcgtgagtataccaagtcgagaggaaatggtttc 657
Query: 1333 tatcgacccagtccgcgccaagagaggggatattcaggacatcaagtaccaagaaatggt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tatcgacccagtccgcgccaagagaggggatattcaggacatcaagtaccaagaaatggt 717
Query: 1393 cagaatctagctgagtcgtgaagc 1416
||||||||||||||||||||||||
Sbjct: 718 cagaatctagctgagtcgtgaagc 741
>gnl|LJGI|DC599622 similar to UniRef100_Q7SCL1 Cluster: GPI-anchored wall transfer
protein 1; n=1; Neurospora crassa|Rep: GPI-anchored
wall, partial (3%)
Length = 477
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 38 aggttgggacttacttcgttggccagtactaccatgtgcttcagaatcaaccagagttcg 97
|||||||||||||||| || || |||||||||||| ||||||||||||| |||||| |||
Sbjct: 234 aggttgggacttactttgtggggcagtactaccatatgcttcagaatcagccagagatcg 293
Query: 98 t 98
|
Sbjct: 294 t 294
>gnl|LJGI|TC80427 similar to UniRef100_A7NXI7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 567
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 38 aggttgggacttacttcgttggccagtactaccatgtgcttcagaatcaaccagagttcg 97
|||||||||||||||| || || |||||||||||| ||||||||||||| |||||| |||
Sbjct: 33 aggttgggacttactttgtggggcagtactaccatatgcttcagaatcagccagagatcg 92
Query: 98 t 98
|
Sbjct: 93 t 93
>gnl|LJGI|TC75809 similar to UniRef100_A7NXI7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 1426
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 38 aggttgggacttacttcgttggccagtactaccatgtgcttcagaatcaaccagagttcg 97
|||||||||||||||| || || |||||||||||| ||||||||||||| |||||| |||
Sbjct: 557 aggttgggacttactttgtggggcagtactaccatatgcttcagaatcagccagagatcg 498
Query: 98 t 98
|
Sbjct: 497 t 497
>gnl|LJGI|TC66381
Length = 759
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 38 aggttgggacttacttcgttggccagtactaccatgtgcttcagaatcaaccagagttcg 97
|||||||||||||||| || || |||||||||||| ||||||||||||| |||||| |||
Sbjct: 223 aggttgggacttactttgtggggcagtactaccatatgcttcagaatcagccagagatcg 282
Query: 98 t 98
|
Sbjct: 283 t 283