Miyakogusa Predicted Gene
- Lj6g3v0085390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0085390.1 Non Chatacterized Hit- tr|K4BYD3|K4BYD3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,44.17,1e-18,seg,NULL,CUFF.57482.1
(378 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81909 749 0.0
gnl|LJGI|TC74361 260 5e-69
gnl|LJGI|TC73849 198 2e-50
gnl|LJGI|FS331061 similar to UniRef100_A7QT64 Cluster: Chromosom... 98 5e-20
gnl|LJGI|BW620203 weakly similar to UniRef100_Q013S1 Cluster: Ch... 98 5e-20
>gnl|LJGI|TC81909
Length = 722
Score = 749 bits (378), Expect = 0.0
Identities = 378/378 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcgtcgctgaattctgacaacaccaacgccaacgccaccaagaaaacaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atggcgtcgtcgctgaattctgacaacaccaacgccaacgccaccaagaaaacaaccaac 296
Query: 61 agcaacgccgtgttcatcgacaccaacctcgatacgcacttggcagtccccgtttatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agcaacgccgtgttcatcgacaccaacctcgatacgcacttggcagtccccgtttatgag 356
Query: 121 cacgacaccgtctccgacctcaaaaagagaatcgagtccgaacacccttcatgctttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cacgacaccgtctccgacctcaaaaagagaatcgagtccgaacacccttcatgctttccc 416
Query: 181 aaatttggccacattcatattcatgggattaaggttcaccgcaccggctacatttatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaatttggccacattcatattcatgggattaaggttcaccgcaccggctacatttatgac 476
Query: 241 ctttcagattccatgtctgtcacaaatgcctttaatggtttcaatgacggctggttcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctttcagattccatgtctgtcacaaatgcctttaatggtttcaatgacggctggttcctt 536
Query: 301 actgttgaggcttcttcattgggggaggaggctacacaaagtgaccaattgattactcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 actgttgaggcttcttcattgggggaggaggctacacaaagtgaccaattgattactcat 596
Query: 361 gcttctcctaagtcctaa 378
||||||||||||||||||
Sbjct: 597 gcttctcctaagtcctaa 614
>gnl|LJGI|TC74361
Length = 648
Score = 260 bits (131), Expect = 5e-69
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 248 attccatgtctgtcacaaatgcctttaatggtttcaatgacggctggttccttactgttg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 attccatgtctgtcacaaatgcctttaatggtttcaatgacggctggttccttactgttg 126
Query: 308 aggcttcttcattgggggaggaggctacacaaagtgaccaattgattactcatgcttctc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aggcttcttcattgggggaggaggctacacaaagtgaccaattgattactcatgcttctc 186
Query: 368 ctaagtcctaa 378
|||||||||||
Sbjct: 187 ctaagtcctaa 197
Score = 133 bits (67), Expect = 9e-31
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 80 acaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtctccgacc 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtctccgacc 60
Query: 140 tcaaaaa 146
|||||||
Sbjct: 61 tcaaaaa 67
>gnl|LJGI|TC73849
Length = 1271
Score = 198 bits (100), Expect = 2e-50
Identities = 184/212 (86%)
Strand = Plus / Plus
Query: 73 ttcatcgacaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtc 132
||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||| |
Sbjct: 144 ttcatcgacaccaacctcgatacacacttggcagtcgacgtttttgaccacgacaccgcc 203
Query: 133 tccgacctcaaaaagagaatcgagtccgaacacccttcatgctttcccaaatttggccac 192
|||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||
Sbjct: 204 tccgacctcaaaaagagaatcgagtcagaacaccgttcatgctttccggaatttgggcac 263
Query: 193 attcatattcatgggattaaggttcaccgcaccggctacatttatgacctttcagattcc 252
|| ||| ||||||||||||||||| | |||| || ||| |||| | || ||||||||
Sbjct: 264 atacatgttcatgggattaaggttaagcgcaaggggtactcttatcagctagcagattcc 323
Query: 253 atgtctgtcacaaatgcctttaatggtttcaa 284
|||| ||| | ||||||||||| |||||||||
Sbjct: 324 atgtgtgtgagaaatgcctttagtggtttcaa 355
>gnl|LJGI|FS331061 similar to UniRef100_A7QT64 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 808
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 73 ttcatcgacaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtc 132
||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||| |
Sbjct: 108 ttcatcgacaccaacctcgatacacacttggcagtcgacgtttttgaccacgacaccgcc 167
Query: 133 tccgacctcaaaa 145
|||||||||||||
Sbjct: 168 tccgacctcaaaa 180
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 146 agagaatcgagtccgaacacccttcatgctttcccaaatttggccacattcatattcatg 205
||||||||||||| ||||||| |||||||||||| ||||||| ||||| ||| ||||||
Sbjct: 257 agagaatcgagtcagaacaccgttcatgctttccggaatttgggcacatacatgttcatg 316
Query: 206 ggattaaggt 215
||||||||||
Sbjct: 317 ggattaaggt 326
>gnl|LJGI|BW620203 weakly similar to UniRef100_Q013S1 Cluster: Chromosome 08 contig 1,
DNA sequence; n=1; Ostreococcus tauri|Rep: Chromosome 08
contig 1, DNA sequence - Ostreococcus tauri, partial
(3%)
Length = 442
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 73 ttcatcgacaccaacctcgatacgcacttggcagtccccgtttatgagcacgacaccgtc 132
||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||| |
Sbjct: 110 ttcatcgacaccaacctcgatacacacttggcagtcgacgtttttgaccacgacaccgcc 169
Query: 133 tccgacctcaaaa 145
|||||||||||||
Sbjct: 170 tccgacctcaaaa 182
Score = 97.6 bits (49), Expect = 5e-20
Identities = 148/181 (81%)
Strand = Plus / Plus
Query: 146 agagaatcgagtccgaacacccttcatgctttcccaaatttggccacattcatattcatg 205
||||||||||||| |||||| |||||||||||| ||||||| ||||| ||| ||||||
Sbjct: 259 agagaatcgagtcaaaacaccgttcatgctttccggaatttgggcacatacatgttcatg 318
Query: 206 ggattaaggttcaccgcaccggctacatttatgacctttcagattccatgtctgtcacaa 265
||||||||||| |||||| || ||| |||| | || || ||||||||| ||| | ||
Sbjct: 319 ggattaaggttaaccgcaaggggtactcttatcagctagcaaattccatgtgtgtgaaaa 378
Query: 266 atgcctttaatggtttcaatgacggctggttccttactgttgaggcttcttcattggggg 325
||||||||| ||||||||| | |||||| | ||| |||| |||||||| |||| ||||
Sbjct: 379 atgcctttagtggtttcaaaaagagctggtacattagtgttcaggcttctgcattagggg 438
Query: 326 a 326
|
Sbjct: 439 a 439