Miyakogusa Predicted Gene
- Lj6g3v0082160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0082160.1 Non Chatacterized Hit- tr|I1NEN5|I1NEN5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20730
PE,90.87,0,Modified RING finger domain,U box domain; WD40 repeats,WD40
repeat; WD_REPEATS_1,WD40 repeat, conser,CUFF.57497.1
(1578 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57467 1507 0.0
gnl|LJGI|TC58120 similar to UniRef100_A7NXH9 Cluster: Chromosome... 904 0.0
gnl|LJGI|TC59574 similar to UniRef100_UPI00001623B3 Cluster: tra... 327 1e-88
gnl|LJGI|TC65155 similar to UniRef100_A7NXH9 Cluster: Chromosome... 90 5e-17
>gnl|LJGI|TC57467
Length = 860
Score = 1507 bits (760), Expect = 0.0
Identities = 760/760 (100%)
Strand = Plus / Plus
Query: 1 atgaattgctccatctccggtgagattccggaagagcccgtcgtgtccaggaactctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgaattgctccatctccggtgagattccggaagagcccgtcgtgtccaggaactctggt 160
Query: 61 cttctcttcgagaagcgtttgatcgagagacacatatcggattatgggaaatgtccaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cttctcttcgagaagcgtttgatcgagagacacatatcggattatgggaaatgtccaatt 220
Query: 121 actggagaaccacttactctggatgacattgtaccaatcaaaactggcaagatagtgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 actggagaaccacttactctggatgacattgtaccaatcaaaactggcaagatagtgaag 280
Query: 181 cccagacctgtgcaagcagctagcatccctggcatgcttggaatgtttcaaaatgaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cccagacctgtgcaagcagctagcatccctggcatgcttggaatgtttcaaaatgaatgg 340
Query: 241 gatgggttgatgctatcaaattttgcattggagcaacaattgcacaccgcaaggcaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gatgggttgatgctatcaaattttgcattggagcaacaattgcacaccgcaaggcaagag 400
Query: 301 ctaagtcatgctctatatcagcatgatgctgcttgccgcgtgattgcaagacttaaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctaagtcatgctctatatcagcatgatgctgcttgccgcgtgattgcaagacttaaaaag 460
Query: 361 gaaagagatgaagctaggtctctacttgcacaggcagaaaggcagttccctatttctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gaaagagatgaagctaggtctctacttgcacaggcagaaaggcagttccctatttctaca 520
Query: 421 ccaaatgccataacagcccctgtcctaagcaatgggaaaagagctgctgaggatgaggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ccaaatgccataacagcccctgtcctaagcaatgggaaaagagctgctgaggatgaggag 580
Query: 481 ctggcacctagtgcgaagagaatacatcctggaatatctaaaatcataattgatgagcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctggcacctagtgcgaagagaatacatcctggaatatctaaaatcataattgatgagcta 640
Query: 541 acagactgcaacgctgctctttcacagcagaggaaaaagcgccagattcctgcaactttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 acagactgcaacgctgctctttcacagcagaggaaaaagcgccagattcctgcaactttg 700
Query: 601 gctcctgttgacgctctggagacatacacccaaatatctagtcatccctttcacaaaact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gctcctgttgacgctctggagacatacacccaaatatctagtcatccctttcacaaaact 760
Query: 661 aacaaacaaggcattatatgtcttgatatcctttattctaaggacctaattgcaactgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aacaaacaaggcattatatgtcttgatatcctttattctaaggacctaattgcaactgga 820
Query: 721 ggtgttgatacaaatgctgttatttttgaccgaccatcag 760
||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ggtgttgatacaaatgctgttatttttgaccgaccatcag 860
>gnl|LJGI|TC58120 similar to UniRef100_A7NXH9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 864
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1123 gattctattgttaagatctgggatgtgaaaagtcaggcaaatgttgctaagtttgatgga 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gattctattgttaagatctgggatgtgaaaagtcaggcaaatgttgctaagtttgatgga 61
Query: 1183 catgtagggcatgtgaatgccatatctttttccgagaatggatactaccttgcgactgca 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 catgtagggcatgtgaatgccatatctttttccgagaatggatactaccttgcgactgca 121
Query: 1243 gctcatgatggtgtgaagctttgggatctacgtaaattgaagaacttccgtaatttcgct 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gctcatgatggtgtgaagctttgggatctacgtaaattgaagaacttccgtaatttcgct 181
Query: 1303 ccatatgactcagaaactccgacgaactccgtggagttcgaccacagtggatcctacatt 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccatatgactcagaaactccgacgaactccgtggagttcgaccacagtggatcctacatt 241
Query: 1363 gcaattgcaggctctgatgtaagaattcaccaagttgcaaatgtgaaatctgaatggaac 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcaattgcaggctctgatgtaagaattcaccaagttgcaaatgtgaaatctgaatggaac 301
Query: 1423 attatcaaaacttttcctgatttatctggaacagggaaggcaacgtgtgtcaaatttggt 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 attatcaaaacttttcctgatttatctggaacagggaaggcaacgtgtgtcaaatttggt 361
Query: 1483 cctgattcaaaatatgtggcggttggatcaatggaccgaaatcttagaatatttggcttg 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cctgattcaaaatatgtggcggttggatcaatggaccgaaatcttagaatatttggcttg 421
Query: 1543 cctggtgaagatgatgttcctgctgagtcataatgt 1578
||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctggtgaagatgatgttcctgctgagtcataatgt 457
>gnl|LJGI|TC59574 similar to UniRef100_UPI00001623B3 Cluster: transducin family
protein / WD-40 repeat family protein; n=1; Arabidopsis
thaliana|Rep: transducin family protein / WD-40 repeat
family protein - Arabidopsis thaliana, partial (15%)
Length = 764
Score = 327 bits (165), Expect = 1e-88
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1 atgaattgctccatctccggtgagattccggaagagcccgtcgtgtccaggaactctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgaattgctccatctccggtgagattccggaagagcccgtcgtgtccaggaactctggt 122
Query: 61 cttctcttcgagaagcgtttgatcgagagacacatatcggattatgggaaatgtccaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cttctcttcgagaagcgtttgatcgagagacacatatcggattatgggaaatgtccaatt 182
Query: 121 actggagaaccacttactctggatgacattgtaccaatcaaaact 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 actggagaaccacttactctggatgacattgtaccaatcaaaact 227
Score = 303 bits (153), Expect = 2e-81
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 1426 atcaaaacttttcctgatttatctggaacagggaaggcaacgtgtgtcaaatttggtcct 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atcaaaacttttcctgatttatctggaacagggaaggcaacgtgtgtcaaatttggtcct 278
Query: 1486 gattcaaaatatgtggcggttggatcaatggaccgaaatcttagaatatttggcttgcct 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gattcaaaatatgtggcggttggatcaatggaccgaaatcttagaatatttggcttgcct 338
Query: 1546 ggtgaagatgatgttcctgctgagtcataatgt 1578
|||||||||||||||||||||||||||||||||
Sbjct: 339 ggtgaagatgatgttcctgctgagtcataatgt 371
>gnl|LJGI|TC65155 similar to UniRef100_A7NXH9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 746
Score = 89.7 bits (45), Expect = 5e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 868 ttgtggcaagggtcagatgatggtaactataactgcaggcatatattgaggga 920
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 347 ttgtggcaagggtcagatgatggtaactataactgcagacatatcttgaggga 399