Miyakogusa Predicted Gene
- Lj6g3v0061020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0061020.1 tr|Q3EC88|Q3EC88_ARATH Cysteine-rich repeat
secretory protein 12 OS=Arabidopsis thaliana GN=PDLP6
PE,29.87,8e-19,FAMILY NOT NAMED,NULL; Stress-antifung,Gnk2-homologous
domain; GNK2,Gnk2-homologous domain; seg,NULL,CUFF.57461.1
(906 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65388 similar to UniRef100_A7NXI1 Cluster: Chromosome... 795 0.0
gnl|LJGI|TC77320 weakly similar to UniRef100_A7NXI1 Cluster: Chr... 278 6e-74
>gnl|LJGI|TC65388 similar to UniRef100_A7NXI1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 714
Score = 795 bits (401), Expect = 0.0
Identities = 415/417 (99%), Gaps = 2/417 (0%)
Strand = Plus / Plus
Query: 1 atgggttttcctagaaatcccctcttcctttctctgttcttgtttttgctcacaaatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atgggttttcctagaaatcccctcttcctttctctgttcttgtttttgctcacaaatctg 357
Query: 61 ggtctactaccccaactagctgaatctgctgctgcttacacaagcttggtctacaagggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggtctactaccccaactagctgaatctgctgctgcttacacaagcttggtctacaagggt 417
Query: 121 tgttcaaaggacactttctcagatccaaatggtgtttactctcaagctctttctgcacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tgttcaaaggacactttctcagatccaaatggtgtttactctcaagctctttctgcacta 477
Query: 181 tttgggtcactggtttcacaatccaccaaaggaaagttctttaaggccaccactggtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttgggtcactggtttcacaatccaccaaaggaaagttctttaaggccaccactggtagt 537
Query: 241 ggccaaagcagcataactggtctcttccaatgcagaggggatctgagcaattctgactgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggccaaagcagcataactggtctcttccaatgcagaggggatctgagcaattctgactgc 597
Query: 301 tacaactgtgtgagcaagctcccagttttgtctgataagctctgtggtaagactgtagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tacaactgtgtgagcaagctcccagttttgtctgataagctctgtggtaagactgtagct 657
Query: 361 gcaagggttcagcttcaaggttgctacatgctgtacgaggttgctgggtttgctcaa 417
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 658 gcaagggttcagcttcaa-gttgctacatgctgtacga-gttgctgggtttgctcaa 712
>gnl|LJGI|TC77320 weakly similar to UniRef100_A7NXI1 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 507
Score = 278 bits (140), Expect = 6e-74
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 767 caggctcttcatctttttctgggcaaaatgcaggaaagacagtagctataatattaggag 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggctcttcatctttttctgggcaaaatgcaggaaagacagtagctataatattaggag 60
Query: 827 gggcagctggggtggcgtttttgatcattatgttattatttgccaggaatttgatgaaga 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggcagctggggtggcgtttttgatcattatgttattatttgccaggaatttgatgaaga 120
Query: 887 aacatgatgattattgacag 906
||||||||||||||||||||
Sbjct: 121 aacatgatgattattgacag 140