Miyakogusa Predicted Gene

Lj6g3v0059000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0059000.1 tr|B9HPA5|B9HPA5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_557999 PE=4
SV=1,35.03,2e-18,FAMILY NOT NAMED,NULL; DUF3527,Protein of unknown
function DUF3527; seg,NULL,CUFF.57466.1
         (1824 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW594549 similar to UniRef100_A7NXH6 Cluster: Chromosom...   926   0.0  

>gnl|LJGI|BW594549 similar to UniRef100_A7NXH6 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (21%)
          Length = 471

 Score =  926 bits (467), Expect = 0.0
 Identities = 467/467 (100%)
 Strand = Plus / Plus

                                                                        
Query: 898  gataaggctttggactacgtataccagtttcacttgaacaagggaggtcaaaaggttcgt 957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    gataaggctttggactacgtataccagtttcacttgaacaagggaggtcaaaaggttcgt 64

                                                                        
Query: 958  gatattcctgacggtgatttgcagcttgctgggaagatgaatgtatcaacgagtttcact 1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   gatattcctgacggtgatttgcagcttgctgggaagatgaatgtatcaacgagtttcact 124

                                                                        
Query: 1018 ctctgccgaaacaattgtagaataatggagacggagtttacattatttcataacattgaa 1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  ctctgccgaaacaattgtagaataatggagacggagtttacattatttcataacattgaa 184

                                                                        
Query: 1078 atattgtccacatcagagcattctcacaggaagaacaagggcctgacgaaaaaagtgtct 1137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  atattgtccacatcagagcattctcacaggaagaacaagggcctgacgaaaaaagtgtct 244

                                                                        
Query: 1138 aacgtcttcagaactagtccatcttcaaaacgcagaacgctctcaaaatttggcggatct 1197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245  aacgtcttcagaactagtccatcttcaaaacgcagaacgctctcaaaatttggcggatct 304

                                                                        
Query: 1198 agtgccatagatgagagttgtctgtgggagccgcatgcttttggagggaccaatttgtta 1257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305  agtgccatagatgagagttgtctgtgggagccgcatgcttttggagggaccaatttgtta 364

                                                                        
Query: 1258 gagtctaatgttcctcccaattttgagatggctgccattgttgtgaaagaccatcttcct 1317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365  gagtctaatgttcctcccaattttgagatggctgccattgttgtgaaagaccatcttcct 424

                                                           
Query: 1318 tgtaataagccacaaaaagtaggaggctggggtttgaaatttctcaa 1364
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425  tgtaataagccacaaaaagtaggaggctggggtttgaaatttctcaa 471