Miyakogusa Predicted Gene

Lj6g3v0028860.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0028860.1 Non Chatacterized Hit- tr|I1JEQ2|I1JEQ2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.36,0.034,seg,NULL,CUFF.57399.1
         (160 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP069534 similar to UniRef100_A7P2Y4 Cluster: Chromosom...   149   6e-36
gnl|LJGI|TC74477 similar to UniRef100_A7P2Y4 Cluster: Chromosome...   101   1e-21

>gnl|LJGI|BP069534 similar to UniRef100_A7P2Y4 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 408

 Score =  149 bits (75), Expect = 6e-36
 Identities = 78/79 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  ttgttgctaaccagtaggcacaatgaactggcaaaaattcatgtcaatggccatctgatt 141
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ttgttgctaaccagcaggcacaatgaactggcaaaaattcatgtcaatggccatctgatt 166

                              
Query: 142 aaggtattacatcaatgag 160
           |||||||||||||||||||
Sbjct: 165 aaggtattacatcaatgag 147


>gnl|LJGI|TC74477 similar to UniRef100_A7P2Y4 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 955

 Score =  101 bits (51), Expect = 1e-21
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 82  ttgttgctaaccagtaggcacaatgaactggcaaaaattcatgtcaatggccatctgatt 141
           |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 67  ttgttgctaaccagtatgcacaatgaactggcaaaaattcatgtccatgggcatctgatt 126

              
Query: 142 aag 144
           |||
Sbjct: 127 aag 129