Miyakogusa Predicted Gene
- Lj6g3v0024590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0024590.1 CUFF.57382.1
(336 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64965 similar to UniRef100_A7NXF9 Cluster: Chromosome... 537 e-152
gnl|LJGI|BP055368 similar to UniRef100_A7NXF9 Cluster: Chromosom... 208 2e-53
gnl|LJGI|TC66705 similar to UniRef100_A7Q1N9 Cluster: Chromosome... 143 8e-34
gnl|LJGI|GO020635 homologue to UniRef100_A7NXF9 Cluster: Chromos... 72 2e-12
gnl|LJGI|AV777968 weakly similar to UniRef100_A7NXF9 Cluster: Ch... 66 1e-10
gnl|LJGI|TC69528 similar to UniRef100_A7PN90 Cluster: Chromosome... 58 4e-08
>gnl|LJGI|TC64965 similar to UniRef100_A7NXF9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 890
Score = 537 bits (271), Expect = e-152
Identities = 271/271 (100%)
Strand = Plus / Plus
Query: 66 cagtgaagaggaagctaagaagaggatttacagtatttcctgtgagaagtaccttggatt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagtgaagaggaagctaagaagaggatttacagtatttcctgtgagaagtaccttggatt 423
Query: 126 tggatgcgagattgatgaggagacatctgataagctggatgggaaggctggaattatgtt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tggatgcgagattgatgaggagacatctgataagctggatgggaaggctggaattatgtt 483
Query: 186 tgttctcccagattcatatgttgatcctgaatacaaagactatggtggtgaactgtttgt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgttctcccagattcatatgttgatcctgaatacaaagactatggtggtgaactgtttgt 543
Query: 246 gaatggagcgatcgtacagaggccacctgaaagacagaaaaggtttggacagaaacaaac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaatggagcgatcgtacagaggccacctgaaagacagaaaaggtttggacagaaacaaac 603
Query: 306 aaccagaaagacgtcacgaaagatacaatga 336
|||||||||||||||||||||||||||||||
Sbjct: 604 aaccagaaagacgtcacgaaagatacaatga 634
>gnl|LJGI|BP055368 similar to UniRef100_A7NXF9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 514
Score = 208 bits (105), Expect = 2e-53
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 232 ggtgaactgtttgtgaatggagcgatcgtacagaggccacctgaaagacagaaaaggttt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggtgaactgtttgtgaatggagcgatcgtacagaggccacctgaaagacagaaaaggttt 296
Query: 292 ggacagaaacaaacaaccagaaagacgtcacgaaagatacaatga 336
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggacagaaacaaacaaccagaaagacgtcacgaaagatacaatga 251
>gnl|LJGI|TC66705 similar to UniRef100_A7Q1N9 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1052
Score = 143 bits (72), Expect = 8e-34
Identities = 180/216 (83%)
Strand = Plus / Plus
Query: 66 cagtgaagaggaagctaagaagaggatttacagtatttcctgtgagaagtaccttggatt 125
|||||| |||||||||||||||| |||||||| | | || ||||||| |||| |||||||
Sbjct: 480 cagtgaggaggaagctaagaagaagatttacaatgtgtcttgtgagaggtactttggatt 539
Query: 126 tggatgcgagattgatgaggagacatctgataagctggatgggaaggctggaattatgtt 185
|||||| ||||||||||||||||| ||| ||||| | || |||| | ||| | ||||
Sbjct: 540 tggatgtgagattgatgaggagacgtctaataagtttgaagggatgaatggtgtgttgtt 599
Query: 186 tgttctcccagattcatatgttgatcctgaatacaaagactatggtggtgaactgtttgt 245
||| || || ||||| |||||||||||||| ||||| |||||||| | |||| | |||||
Sbjct: 600 tgtcctaccggattcgtatgttgatcctgagtacaaggactatggggctgaattatttgt 659
Query: 246 gaatggagcgatcgtacagaggccacctgaaagaca 281
|||||||| ||| || ||||| || |||||||||||
Sbjct: 660 gaatggagagattgtccagagacctcctgaaagaca 695
>gnl|LJGI|GO020635 homologue to UniRef100_A7NXF9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 627
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 202 tatgttgatcctgaatacaaagactatggtggtgaactgtttgtgaatggagcgatcgta 261
|||||||||||||| ||||| |||||||| | |||| | ||||||||||||| ||| ||
Sbjct: 202 tatgttgatcctgagtacaaggactatggggctgaattatttgtgaatggagagattgtc 261
Query: 262 cagaggccacctgaaagaca 281
||||| || |||||||||||
Sbjct: 262 cagagacctcctgaaagaca 281
>gnl|LJGI|AV777968 weakly similar to UniRef100_A7NXF9 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 383
Score = 65.9 bits (33), Expect = 1e-10
Identities = 95/115 (82%), Gaps = 8/115 (6%)
Strand = Plus / Minus
Query: 55 ttcttggttttcagtgaagaggaagctaagaagaggattta--cagtatttcc------t 106
|||||||||||||||||||||||| ||||| ||| |||| |||||||||| |
Sbjct: 237 ttcttggttttcagtgaagaggaaactaaggagaatattttttcagtatttcccgtgact 178
Query: 107 gtgagaagtaccttggatttggatgcgagattgatgaggagacatctgataagct 161
|||||| || | || || ||||||||||||| |||||||||||| ||||||||||
Sbjct: 177 gtgagatgtcctttagacttggatgcgagatggatgaggagacacctgataagct 123
>gnl|LJGI|TC69528 similar to UniRef100_A7PN90 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 717
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 125 ttggatgcgagattgatgaggagacatctgataagct 161
||||||||||||||||||||||| || ||||||||||
Sbjct: 76 ttggatgcgagattgatgaggagccacctgataagct 112