Miyakogusa Predicted Gene
- Lj6g3v0003490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0003490.1 CUFF.57397.1
(2238 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341769 similar to UniRef100_A7NXE9 Cluster: Chromosom... 1229 0.0
gnl|LJGI|FS360077 similar to UniRef100_A7NXE9 Cluster: Chromosom... 583 e-165
gnl|LJGI|BP069522 weakly similar to UniRef100_A0N068 Cluster: Gl... 103 5e-21
>gnl|LJGI|FS341769 similar to UniRef100_A7NXE9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 755
Score = 1229 bits (620), Expect = 0.0
Identities = 646/655 (98%), Gaps = 6/655 (0%)
Strand = Plus / Plus
Query: 1 atgtccactcgccgcggcggcggaggcgacgccgccctcagatccaccaccaggtccgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atgtccactcgccgcggcggcggaggcgacgccgccctcagatccaccaccaggtccgtc 166
Query: 61 actcctctctcaacctccaccgaaaaggacaacaacaacaaccctcgcagatccacttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 actcctctctcaacctccaccgaaaaggacaacaacaacaaccctcgcagatccacttct 226
Query: 121 cgcggatccggatccacccacaacccgacccacaaacccgtcaccaaacccgtccctcgc 180
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 227 cgcgga------tccacccacaacccgacccataaacccgtcaccaaacccgtccctcgc 280
Query: 181 ctcgaccgcagatcctcctcctccttctcctcgctcccccgaggccgaagccccagcccc 240
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gtcgaccgcagatcttcctcctccttctcctcgctcccccgaggccgaagccccagcccc 340
Query: 241 tccgacctccgccaaacccgccgcgtctccgtcgaccgggccgccaaggaccccacccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tccgacctccgccaaacccgccgcgtctccgtcgaccgggccgccaaggaccccacccac 400
Query: 301 ctgaagcgccgcggtgatccgatcggtaaatcagccgagaaacccagccgcaacgaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctgaagcgccgcggtgatccgatcggtaaatcagccgagaaacccagccgcaacgaaaag 460
Query: 361 ttgaaaacttgctcgaaggaaagtgaagagaaggacaagtaccctagcaggcttcacgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttgaaaacttgctcgaaggaaagtgaagagaaggacaagtaccctagcaggcttcacgag 520
Query: 421 aagcttgcgtttttggaagggaaggtgaagagaattgcctctgatatcaagaagaccaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aagcttgcgtttttggaagggaaggtgaagagaattgcctctgatatcaagaagaccaag 580
Query: 481 gagatgttggatatgaacaaccctgatgcttcaaaggtcatactttctgatattcaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gagatgttggatatgaacaaccctgatgcttcaaaggtcatactttctgatattcaagac 640
Query: 541 aagatctcgggtatcgagaaggccatggttcgtgtcgtttcgaccgaaaatgaaaatgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aagatctcgggtatcgagaaggccatggttcgtgtcgtttcgaccgaaaatgaaaatgat 700
Query: 601 aatggtgataatggtagcaccagcaagcaattgggtgtgtgtgttgttaatgttg 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aatggtgataatggtagcaccagcaagcaattgggtgtgtgtgttgttaatgttg 755
>gnl|LJGI|FS360077 similar to UniRef100_A7NXE9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 751
Score = 583 bits (294), Expect = e-165
Identities = 294/294 (100%)
Strand = Plus / Minus
Query: 1945 cttggatgcaccagctcaagctcaatgggcaagaagcagtcctcatcaccacaagttcaa 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cttggatgcaccagctcaagctcaatgggcaagaagcagtcctcatcaccacaagttcaa 692
Query: 2005 caattttcgttgcgcagacaagcactgtttagcacttatgctcttccagagtccagtgta 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 caattttcgttgcgcagacaagcactgtttagcacttatgctcttccagagtccagtgta 632
Query: 2065 cattcccattatgcagcaatcagccaagtttggggtaattctgactttgtcatggctgtt 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cattcccattatgcagcaatcagccaagtttggggtaattctgactttgtcatggctgtt 572
Query: 2125 aacggcctaggactacatgtgtttgatgcgcagaaagatgatccattaagggttctcaat 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aacggcctaggactacatgtgtttgatgcgcagaaagatgatccattaagggttctcaat 512
Query: 2185 ctcaatatggattcgtcctccaatgctcaaagtttgagggaagttgttggtcca 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctcaatatggattcgtcctccaatgctcaaagtttgagggaagttgttggtcca 458
>gnl|LJGI|BP069522 weakly similar to UniRef100_A0N068 Cluster: Glycine-rich protein;
n=1; Gossypium hirsutum|Rep: Glycine-rich protein -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (23%)
Length = 429
Score = 103 bits (52), Expect = 5e-21
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 231 ccccagcccctccgacctccgccaaacccgccgcgtctccgtcgaccgggccgccaagga 290
|||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 350 ccccagcccctccgacgtccgccaaacccgccaggtctccgtggaccgggcggccaagga 291
Query: 291 ccccacccacctgaagcgccgcggtgatccgatcggtaaatcagccgagaaaccca 346
|| ||||||| ||||| |||||||||| || ||||| |||| ||||||||||
Sbjct: 290 accggcccacctaaagcggcgcggtgatctaattagtaaaccagcggagaaaccca 235