Miyakogusa Predicted Gene

Lj6g3v0003340.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0003340.1 Non Chatacterized Hit- tr|A9NW78|A9NW78_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,36.31,8e-19,seg,NULL,CUFF.57355.1
         (648 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70134 weakly similar to UniRef100_A7NWT1 Cluster: Chr...  1263   0.0  

>gnl|LJGI|TC70134 weakly similar to UniRef100_A7NWT1 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (44%)
          Length = 970

 Score = 1263 bits (637), Expect = 0.0
 Identities = 647/649 (99%), Gaps = 1/649 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccttcgctagtgtcacagctcttgttgttgttgcgtttcttcttgtccaacaacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  atggccttcgctagtgtcacagctcttgttgttgttgcgtttcttcttgtccaacaacct 150

                                                                       
Query: 61  ctttctgcaaaaagtgacttcctttctcctctgcttgctcccatctttgatgatgtgtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ctttctgcaaaaagtgacttcctttctcctctgcttgctcccatctttgatgatgtgtgc 210

                                                                       
Query: 121 aaaaaagtggaatgtggaaaaggaagttgcaaggcttctcagaacagcactttcttcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aaaaaagtggaatgtggaaaaggaagttgcaaggcttctcagaacagcactttcttcttt 270

                                                                       
Query: 181 gagtgtgagtgtgaacctggttggaagcaagcaccttcttccaatgatacgcttggcttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gagtgtgagtgtgaacctggttggaagcaagcaccttcttccaatgatacgcttggcttg 330

                                                                       
Query: 241 aagtttcttccttgcatcgttcccaattgtacattgaactactcttgctccaaagcccct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aagtttcttccttgcatcgttcccaattgtacattgaactactcttgctccaaagcccct 390

                                                                       
Query: 301 gcccctgctcaagaaaaagcaagaaaagtcgatgaatcagtatttgatgcttgtcattgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcccctgctcaagaaaaagcaagaaaagtcgatgaatcagtatttgatgcttgtcattgg 450

                                                                       
Query: 361 gttga-ttgtggaggtggttcatgcaacaagacatccatgttgtcctatagttgtgaatg 419
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gttgatttgtggaggtggttcatgcaacaagacatccatgttgtcctatagttgtgaatg 510

                                                                       
Query: 420 tgatgctggctattacaatctcctcaacgtcacttccttcccttgctacagagaatgtgc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tgatgctggctattacaatctcctcaacgtcacttccttcccttgctacagagaatgtgc 570

                                                                       
Query: 480 tcttggcatgggttgctctgaccttggactatcaatgtcaaattcttccacttctgaacc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tcttggcatgggttgctctgaccttggactatcaatgtcaaattcttccacttctgaacc 630

                                                                       
Query: 540 accagcattgaatgacaacagtaagaatggggctagctcggctctacaaggaagttccct 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 accagcattgaatgacaacagtaagaatggggctagctcggctctacaaggaagttccct 690

                                                            
Query: 600 ttggttggtcatgctgattatgttcatggcaaagatcctgttgcaatag 648
           |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 691 ttggttggtcatgctgattatgttcatgacaaagatcctgttgcaatag 739