Miyakogusa Predicted Gene

Lj5g3v2300320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2300320.1 Non Chatacterized Hit- tr|I1NJC9|I1NJC9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.03,0,OLIGOPEPTIDE TRANSPORTER-RELATED,NULL; OLIGOPEPTIDE
TRANSPORTER-RELATED,Proton-dependent oligopeptid,CUFF.57313.1
         (660 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS350309 similar to UniRef100_A7PC99 Cluster: Chromosom...    62   5e-09
gnl|LJGI|TC58085 similar to UniRef100_A7PC99 Cluster: Chromosome...    62   5e-09

>gnl|LJGI|FS350309 similar to UniRef100_A7PC99 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 618

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 362 tttggctttgtaccattatctattcagttgtgtttacacaaatggcttctctttttgttg 421
           ||||||| || ||||| ||||| ||||| || || |||||||||||||||||||| || |
Sbjct: 410 tttggctatgcaccataatctactcagtagttttcacacaaatggcttctcttttcgtgg 469

                  
Query: 422 agcaagg 428
           |||||||
Sbjct: 470 agcaagg 476


>gnl|LJGI|TC58085 similar to UniRef100_A7PC99 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 1741

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 362 tttggctttgtaccattatctattcagttgtgtttacacaaatggcttctctttttgttg 421
           ||||||| || ||||| ||||| ||||| || || |||||||||||||||||||| || |
Sbjct: 259 tttggctatgcaccataatctactcagtagttttcacacaaatggcttctcttttcgtgg 318

                  
Query: 422 agcaagg 428
           |||||||
Sbjct: 319 agcaagg 325