Miyakogusa Predicted Gene
- Lj5g3v2298200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2298200.1 Non Chatacterized Hit- tr|A5AQQ0|A5AQQ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.13,2e-18,SUBFAMILY NOT NAMED,NULL; GEMIN2,Survival motor neuron
interacting protein 1; SIP1,NULL; coiled-coil,CUFF.57312.1
(1533 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63992 similar to UniRef100_A7QS54 Cluster: Chromosome... 1429 0.0
gnl|LJGI|AV767772 similar to UniRef100_Q7RFI2 Cluster: Drosophil... 74 3e-12
>gnl|LJGI|TC63992 similar to UniRef100_A7QS54 Cluster: Chromosome chr5 scaffold_156,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_156, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 759
Score = 1429 bits (721), Expect = 0.0
Identities = 724/725 (99%)
Strand = Plus / Plus
Query: 809 ttaggcgtgtcaggtgggaagcaggtcaaattccaaaagtgaaggtagcaaaactggaca 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaggcgtgtcaggtgggaagcaggtcaaattccaaaagtgaaggtagcaaaactggaca 60
Query: 869 gatgtaaacttaacaaggaacaaagtgcttacatgcccaagattcccgatgttgccaagt 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgtaaacttaacaaggaacaaagtgcttacatgcccaagattcccgatgttgccaagt 120
Query: 929 gtcctgagcatctgttgccatcgaaacagtgggaggatgtatttcttgctgagttttcat 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcctgagcatctgttgccatcgaaacagtgggaggatgtatttcttgctgagttttcat 180
Query: 989 cactgagagcgaatctctcatgtcttgaaggttcaagtgtcatggattccagtagtctac 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cactgagagcgaatctctcatgtcttgaaggttcaagtgtcatggattccagtagtctac 240
Query: 1049 aacctgttcattcctcccaattagttgggaacaattgtggagaatctgcaagtgttatga 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacctgttcattcctcccaattagttgggaacaattgtggagaatctgcaagtgttatga 300
Query: 1109 accgagatgtcctacatagcattgataaggcaatggatcaacttacaattaacttgacag 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accgagatgtcctacatagcattgataaggcaatggatcaacttacaattaacttgacag 360
Query: 1169 gtgaagttaaagatacaacacagccactgaagacaggatcaaaaacttccattgatcaaa 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgaagttaaagatacaacacagccactgaagacaggatcaaaaacttccattgatcaaa 420
Query: 1229 ctactcctcctttgctttctgtagtcttaggaatggactctgtagcccgcgtatcgatgt 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctactcctcctttgctttctgtagtcttaggaatggactctgtagcccgcgtatcgatgt 480
Query: 1289 tgctgaaacgaattagcttgctcgaatctgcaaacactatcacaagaaatgattgcatgt 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctgaaacgaattagcttgctcgaatctgcaaacactatcacaagaaatgattgcatgt 540
Query: 1349 ggctttttgctctctgtgcaacagttgatgctccactacatgctgacactagtgccgccc 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggctttttgctctctgtgcaacagttgatgctccactacatgctgacactagtgccgccc 600
Query: 1409 tcaggagtctgctgcggaagtgtgctagcattcgtgctggaaaggctggactagacgagg 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaggagtctgctgcggaagtgtgctagcattcgtgctggaaaggctggactagacgagg 660
Query: 1469 aggctgtgatgttgaatatactagctactatttcagggagatattttggacaatctgaaa 1528
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 661 aggctgtgatgttgaatatactagctgctatttcagggagatattttggacaatctgaaa 720
Query: 1529 cctga 1533
|||||
Sbjct: 721 cctga 725
>gnl|LJGI|AV767772 similar to UniRef100_Q7RFI2 Cluster: Drosophila melanogaster
BcDNA.GH02833; n=1; Plasmodium yoelii yoelii|Rep:
Drosophila, partial (1%)
Length = 460
Score = 73.8 bits (37), Expect = 3e-12
Identities = 123/153 (80%), Gaps = 9/153 (5%)
Strand = Plus / Plus
Query: 23 atgcttcagttctcgccggcgactgcttcaccaactcacaagaacacctcgttcttgctg 82
||||||| ||||||||||| ||||| |||| |||||||||||||||||| ||| |||||
Sbjct: 106 atgcttccgttctcgccggggactggttcatcaactcacaagaacaccttgtttttgctc 165
Query: 83 ctgctgc---------tgcggaggaggaactgctccaagttaagaagaaacaactcctcg 133
|||||| || ||||||||||||| ||| || || |||||||||||||
Sbjct: 166 atgctgcaaacgacaacaggggggaggaactgctcaaagggaaaaaaaaacaactcctcg 225
Query: 134 acgaactcgaatctgctctcgtcacacccaaag 166
| ||||| ||| ||||||||||||||||||||
Sbjct: 226 aggaactgaaatttgctctcgtcacacccaaag 258