Miyakogusa Predicted Gene

Lj5g3v2298050.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2298050.1 CUFF.57274.1
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP069522 weakly similar to UniRef100_A0N068 Cluster: Gl...   553   e-157
gnl|LJGI|FS341769 similar to UniRef100_A7NXE9 Cluster: Chromosom...    96   1e-19

>gnl|LJGI|BP069522 weakly similar to UniRef100_A0N068 Cluster: Glycine-rich protein;
           n=1; Gossypium hirsutum|Rep: Glycine-rich protein -
           Gossypium hirsutum (Upland cotton) (Gossypium
           mexicanum), partial (23%)
          Length = 429

 Score =  553 bits (279), Expect = e-157
 Identities = 282/283 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagatccgaattcttcaagtgatttactaatcagatccacttcttcctcttcttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atggcagatccgaattcttcaagtgatttactaatcagatccacttcttcctcttcttcc 206

                                                                       
Query: 61  actttgccagatccttgttcagatctgttgggtttctccgctggtttactaattagatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 actttgccagatccttgttcagatctgttgggtttctccgctggtttactaattagatca 266

                                                                       
Query: 121 ccgcgccgctttaggtgggccggttccttggccgcccggcccacggagacctggcgggtt 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 267 ccgcgccgctttaggtgggccggttccttggccgcccggtccacggagacctggcgggtt 326

                                                                       
Query: 181 tggcggacgtcggaggggctggggagcaaggaggaggaggaggatctgcgatcaaggccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggcggacgtcggaggggctggggagcaaggaggaggaggaggatctgcgatcaaggccc 386

                                                      
Query: 241 gacgggtttgatgacggatttctgggtcgggttgcgagggttg 283
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gacgggtttgatgacggatttctgggtcgggttgcgagggttg 429


>gnl|LJGI|FS341769 similar to UniRef100_A7NXE9 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 755

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                       
Query: 89  tgggtttctccgctggtttactaattagatcaccgcgccgctttaggtgggccggttcct 148
           |||||||||| |||| |||||  ||  |||||||||| ||||| |||||||  || ||||
Sbjct: 446 tgggtttctcggctgatttaccgatcggatcaccgcggcgcttcaggtgggtggggtcct 387

                                                                   
Query: 149 tggccgcccggcccacggagacctggcgggtttggcggacgtcggaggggctgggg 204
           |||| |||||| | ||||||||  ||||||||||||||| ||||||||||||||||
Sbjct: 386 tggcggcccggtcgacggagacgcggcgggtttggcggaggtcggaggggctgggg 331