Miyakogusa Predicted Gene
- Lj5g3v2298050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2298050.1 CUFF.57274.1
(306 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP069522 weakly similar to UniRef100_A0N068 Cluster: Gl... 553 e-157
gnl|LJGI|FS341769 similar to UniRef100_A7NXE9 Cluster: Chromosom... 96 1e-19
>gnl|LJGI|BP069522 weakly similar to UniRef100_A0N068 Cluster: Glycine-rich protein;
n=1; Gossypium hirsutum|Rep: Glycine-rich protein -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (23%)
Length = 429
Score = 553 bits (279), Expect = e-157
Identities = 282/283 (99%)
Strand = Plus / Plus
Query: 1 atggcagatccgaattcttcaagtgatttactaatcagatccacttcttcctcttcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atggcagatccgaattcttcaagtgatttactaatcagatccacttcttcctcttcttcc 206
Query: 61 actttgccagatccttgttcagatctgttgggtttctccgctggtttactaattagatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 actttgccagatccttgttcagatctgttgggtttctccgctggtttactaattagatca 266
Query: 121 ccgcgccgctttaggtgggccggttccttggccgcccggcccacggagacctggcgggtt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 267 ccgcgccgctttaggtgggccggttccttggccgcccggtccacggagacctggcgggtt 326
Query: 181 tggcggacgtcggaggggctggggagcaaggaggaggaggaggatctgcgatcaaggccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggcggacgtcggaggggctggggagcaaggaggaggaggaggatctgcgatcaaggccc 386
Query: 241 gacgggtttgatgacggatttctgggtcgggttgcgagggttg 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gacgggtttgatgacggatttctgggtcgggttgcgagggttg 429
>gnl|LJGI|FS341769 similar to UniRef100_A7NXE9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 755
Score = 95.6 bits (48), Expect = 1e-19
Identities = 99/116 (85%)
Strand = Plus / Minus
Query: 89 tgggtttctccgctggtttactaattagatcaccgcgccgctttaggtgggccggttcct 148
|||||||||| |||| ||||| || |||||||||| ||||| ||||||| || ||||
Sbjct: 446 tgggtttctcggctgatttaccgatcggatcaccgcggcgcttcaggtgggtggggtcct 387
Query: 149 tggccgcccggcccacggagacctggcgggtttggcggacgtcggaggggctgggg 204
|||| |||||| | |||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 386 tggcggcccggtcgacggagacgcggcgggtttggcggaggtcggaggggctgggg 331