Miyakogusa Predicted Gene
- Lj5g3v2297910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2297910.1 Non Chatacterized Hit- tr|I1JTC0|I1JTC0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,63.27,0,SWIB COMPLEX
BAF60B DOMAIN-CONTAINING PROTEIN / PLUS-3 DOMAIN-CONTAINING
PROTEI,NULL; GRB10 INTERACT,CUFF.57281.1
(5289 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69293 similar to UniRef100_A7NTD9 Cluster: Chromosome... 1524 0.0
gnl|LJGI|TC74333 weakly similar to UniRef100_A7NTD8 Cluster: Chr... 922 0.0
gnl|LJGI|TC70924 similar to UniRef100_A7NTD9 Cluster: Chromosome... 321 3e-86
gnl|LJGI|BP075451 UniRef100_A7NTD8 Cluster: Chromosome chr18 sca... 301 2e-80
gnl|LJGI|TC75087 weakly similar to UniRef100_A7NTD8 Cluster: Chr... 280 9e-74
gnl|LJGI|AV778939 similar to UniRef100_Q2S717 Cluster: Outer mem... 131 5e-29
>gnl|LJGI|TC69293 similar to UniRef100_A7NTD9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 1030
Score = 1524 bits (769), Expect = 0.0
Identities = 783/790 (99%)
Strand = Plus / Plus
Query: 4500 aatacagcctgcccaagctgctcggagtagtggtccttcatggacagtttcagcttcatc 4559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatacagcctgcccaagctgctcggagtagtggtccttcatggacagtttcagcttcatc 60
Query: 4560 tccgtcgaaagctgcaccttctggccagataaactcccaagcttctcaatcaaaacacaa 4619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccgtcgaaagctgcaccttctggccagataaactcccaagcttctcaatcaaaacacaa 120
Query: 4620 aggggatgatgacttattctggggtccagttgagcaatccaagctagaaaataagcagtc 4679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggggatgatgacttattctggggtccagttgagcaatccaagctagaaaataagcagtc 180
Query: 4680 aggtttccctcaacttgcaagccaggggagctggggttccaagaatgttcctgtgaaagg 4739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtttccctcaacttgcaagccaggggagctggggttccaagaatgttcctgtgaaagg 240
Query: 4740 taattcaccgggaccactaaatcgacaaaaatcagggagtagtaaactaacagagcagtc 4799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taattcaccgggaccactaaatcgacaaaaatcagggagtagtaaactaacagagcagtc 300
Query: 4800 tctatcagcatcacctgcctcttctcaatcattgctgaaatcnnnnnnngatgccatgac 4859
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 tctatcagcatcacctgcctcttctcaatcattgctgaaatcaaaaaaagatgccatgac 360
Query: 4860 taagaattctgaagccatggacttcagagtttggtgtgagaatgagtgtgtcaggcttat 4919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taagaattctgaagccatggacttcagagtttggtgtgagaatgagtgtgtcaggcttat 420
Query: 4920 tgggacgaaagatacaagtttccttgagttttgcttgaagcaatccagatctgaagcgga 4979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgggacgaaagatacaagtttccttgagttttgcttgaagcaatccagatctgaagcgga 480
Query: 4980 gatgtttctgatagaaaacctcggaacatatgatcctgatcatgaattcattgaaaaatt 5039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgtttctgatagaaaacctcggaacatatgatcctgatcatgaattcattgaaaaatt 540
Query: 5040 cctcaactacatggagttactaccaccagatgttttgaaaatcgcttttcagacacagaa 5099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctcaactacatggagttactaccaccagatgttttgaaaatcgcttttcagacacagaa 600
Query: 5100 tgatggagaagtagctggaggcatgatatctggaaatgcagatttacgcgctatgggaca 5159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgatggagaagtagctggaggcatgatatctggaaatgcagatttacgcgctatgggaca 660
Query: 5160 cactgaggtatctgtgtcaaaaggtggaaagaagggtaagaaagggaaaaaggttagtgc 5219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cactgaggtatctgtgtcaaaaggtggaaagaagggtaagaaagggaaaaaggttagtgc 720
Query: 5220 tgcagttttgggattcaatgtcgtaagtaaccggatcatgatgggtgagatccagacagt 5279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgcagttttgggattcaatgtcgtaagtaaccggatcatgatgggtgagatccagacagt 780
Query: 5280 agaagactaa 5289
||||||||||
Sbjct: 781 agaagactaa 790
>gnl|LJGI|TC74333 weakly similar to UniRef100_A7NTD8 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 543
Score = 922 bits (465), Expect = 0.0
Identities = 474/477 (99%)
Strand = Plus / Plus
Query: 1 atgtctgaccgctcctccgccgctcgcctccacatctccaccgcacctcctcccttccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgtctgaccgctcctccgccgctcgcctccacatctccaccgcacctcctcccttccag 126
Query: 61 atctccaaagatttccaaggctctgacaatccgattccactttccccgcagtggcttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atctccaaagatttccaaggctctgacaatccgattccactttccccgcagtggcttcag 186
Query: 121 ccgaagccaggggagaataaacctggaacaggaaatgtggaaaaccatgtgttctctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ccgaagccaggggagaataaacctggaacaggaaatgtggaaaaccatgtgttctctact 246
Query: 181 ccggcatatgacaatccctctgagactgttaagacatctggaattggagaggatgtccct 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 247 ccggcatatgacaatccctctgagactgttaagacatctggaatgggagaggatgtccct 306
Query: 241 gatggccataagagaaaggatgtctttaggccatccgtgcttgactctgaaaatgggcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gatggccataagagaaaggatgtctttaggccatccgtgcttgactctgaaaatgggcgc 366
Query: 301 cgtgaccgttggcgggatgaagaaagagacactaagtcctccatgcgcaacgatcgttgg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 367 cgtgaccgtgggcgggatgaagaaagagacactaagtcctccatgcgcaacgatcgtggg 426
Query: 361 agggatggagacaaggaccaaggtgatgctcggaaagtggaccgatgggcagaaaaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agggatggagacaaggaccaaggtgatgctcggaaagtggaccgatgggcagaaaaccca 486
Query: 421 tccgcaaggcactttggagaaacacgtcgtggtacacctgatagatggaatgattca 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tccgcaaggcactttggagaaacacgtcgtggtacacctgatagatggaatgattca 543
>gnl|LJGI|TC70924 similar to UniRef100_A7NTD9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1179
Score = 321 bits (162), Expect = 3e-86
Identities = 534/659 (81%), Gaps = 6/659 (0%)
Strand = Plus / Plus
Query: 4424 taagggacattctaaaggagcaggagaaaaagtcttcttctgcagtccccccaagccaag 4483
||||||||||||| ||||||||||||||||| |||||||||| || || ||| || |
Sbjct: 35 taagggacattctgaaggagcaggagaaaaaaacttcttctgctgtgcctgcaaaccctg 94
Query: 4484 tgtctacccttcagaaaatacagcctgcccaagctgctcggagtagtggtccttcatgga 4543
|| |||||| ||||||| ||||||| |||| ||| || ||| ||||| | ||||| |
Sbjct: 95 tgcctacccctcagaaatcacagcctacccaggctacttggaatagtgcttcttcacagt 154
Query: 4544 cagtttcagcttcatctccgtcgaaagctgcaccttctggccagataaactcccaagctt 4603
|| |||||||||| ||||| || |||||||| | | || ||||||||||| |||
Sbjct: 155 caatttcagcttcctctccttctaaagctgcctccccaattcaaataaactcccatgctc 214
Query: 4604 ct---caatcaaaacacaaaggggatgatgacttattctggggtccagttgagcaatcca 4660
|| || |||||| |||||||||||||||||||||| ||||| ||| ||||||| | |
Sbjct: 215 cttcccagtcaaaatacaaaggggatgatgacttattttggggcccaattgagcagccta 274
Query: 4661 agctagaaaataagcagtcaggtttccctcaacttgcaagccaggggagctggggttcca 4720
||| ||||| ||||||||||| ||||||||| |||||||| ||||| ||| ||||||| |
Sbjct: 275 agcaagaaactaagcagtcagatttccctcagcttgcaagtcagggaagccggggttcaa 334
Query: 4721 agaatgttcctgtgaaa---ggtaattcaccgggaccactaaatcgacaaaaatcaggga 4777
| ||| | || | ||| || | |||| | ||| | ||| |||||||||||| ||
Sbjct: 335 aaaatatacccttaaaaaaaggcacttcaactggattattaaccagacaaaaatcagcga 394
Query: 4778 gtagtaaactaacagagcagtctctatcagcatcacctgcctcttctcaatcattgctga 4837
|| |||||| ||| || | | |||||||| |||||||||||||||| ||| | ||||||
Sbjct: 395 gtggtaaaccaactgaacggcctctatcatcatcacctgcctcttcccaaccggtgctga 454
Query: 4838 aatcnnnnnnngatgccatgactaagaattctgaagccatggacttcagagtttggtgtg 4897
||| ||||||||||||||| | |||| ||||| | |||||||| ||||||||
Sbjct: 455 aattgaaaaaagatgccatgactaagcttcctgaggccataggcttcagagattggtgtg 514
Query: 4898 agaatgagtgtgtcaggcttattgggacgaaagatacaagtttccttgagttttgcttga 4957
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 515 agaatgagtgtgtcaggcttattgggacaaaagatacaagtttccttgaattttgcttga 574
Query: 4958 agcaatccagatctgaagcggagatgtttctgatagaaaacctcggaacatatgatcctg 5017
||||||||||||| ||||| ||||||||||| ||||||||||| ||| ||| || ||||
Sbjct: 575 agcaatccagatcagaagctgagatgtttctcatagaaaaccttggatcattcgaccctg 634
Query: 5018 atcatgaattcattgaaaaattcctcaactacatggagttactaccaccagatgttttg 5076
| ||| |||| ||||| ||||||||||| |||| |||| | |||| |||||||||||
Sbjct: 635 accataaatttattgataaattcctcaattacaaggagctgttaccttcagatgttttg 693
Score = 131 bits (66), Expect = 5e-29
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 5188 aagaagggtaagaaagggaaaaaggttagtgctgcagttttgggattcaatgtcgtaagt 5247
||||||||||| ||||| |||||||| ||| |||||||||||||||||||||| || |||
Sbjct: 814 aagaagggtaaaaaaggaaaaaaggtgagtcctgcagttttgggattcaatgttgtgagt 873
Query: 5248 aaccggatcatgatgggtgagatccagacagtagaaga 5285
|||||||||||||||||||||||||| || ||||||||
Sbjct: 874 aaccggatcatgatgggtgagatccaaaccgtagaaga 911
>gnl|LJGI|BP075451 UniRef100_A7NTD8 Cluster: Chromosome chr18 scaffold_1 whole genome
shotgun sequence; n=1; Vitis vinifera|Rep:, partial (1%)
Length = 205
Score = 301 bits (152), Expect = 2e-80
Identities = 191/200 (95%), Gaps = 3/200 (1%)
Strand = Plus / Minus
Query: 1937 gcagtcccacacttgaaagtctgacattgccagaaggtttacaaggatttatgggaaata 1996
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gcagtcccacactcgaaagtctgacattgccagaaggtttacaaggatttatgggaaata 140
Query: 1997 attctggtaatatgggcccgtcaggagttgatggtggaagcgatccttacttgctggcca 2056
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 139 attctggtaatatgggcccgtcaggagttgatggtggaagcgatccttacttgctgccca 80
Query: 2057 aaag-gctggcacttgaacgacagaggtccttacccaat-ccttatccatattggccagg 2114
|| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 79 ccagccctggcacttgaacgacagaggtccttacccaatcccttatccatattgaccagg 20
Query: 2115 ggtagaagctccatctcttc 2134
||||| ||||||||||||||
Sbjct: 19 ggtag-agctccatctcttc 1
>gnl|LJGI|TC75087 weakly similar to UniRef100_A7NTD8 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 747
Score = 280 bits (141), Expect = 9e-74
Identities = 438/536 (81%), Gaps = 7/536 (1%)
Strand = Plus / Plus
Query: 49 cctcccttccagatctccaaagatttccaaggctctgacaatccgattccactttccccg 108
||||| || ||||||||||||||| || ||||||||||||||| ||||||||||| ||
Sbjct: 131 cctccattgcagatctccaaagatgtcacaggctctgacaatcctattccactttcacca 190
Query: 109 cagtggcttcagccgaagccaggggagaataaacctggaacaggaaatgtggaaaaccat 168
|||||||||| ||| ||||| | ||||| |||||||||| |||||||||||| |||| ||
Sbjct: 191 cagtggcttctgccaaagcccgtggagagtaaacctggatcaggaaatgtgggaaacaat 250
Query: 169 gtgttctctactccggcatatgacaatccctctgagactgttaagacatctggaattgga 228
||| |||| | ||| |||||| || | ||| |||||||||||||||||||| | ||||
Sbjct: 251 gtgatctcaattccaccatatggcacccactcagagactgttaagacatctggtaatgga 310
Query: 229 gaggatgtccctgatggccataagagaaaggatgtctttaggccatccgtgcttgactct 288
||||||| | ||||| ||| |||||||||||||| |||||||||||| |||| |||||
Sbjct: 311 gaggatgggcatgatgtccaaaagagaaaggatgtgtttaggccatccatgctggactca 370
Query: 289 gaaaatgggcgccgtgaccgttggcgggatgaagaaagagacactaagtcctccatgcgc 348
|||| ||| || ||||| |||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 371 gaaagtggacgtcgtgatcgttggcgtgatgaggagagagaaactaagtctgccacacgt 430
Query: 349 aacgatcgttggagggatggagacaaggaccaaggtgatgctcggaaagtggaccgatgg 408
|| |||||||||||||| || ||||| |||| ||||||| ||||||||||||| ||||||
Sbjct: 431 aaagatcgttggagggacggggacaaagacctaggtgattctcggaaagtggatcgatgg 490
Query: 409 gcagaaaacccatcc-gcaaggcactttggagaaacacgtcgtggtacacctg------a 461
||| | | | ||| ||| | |||| |||||| ||||||||||| || ||| |
Sbjct: 491 gcaagatagtcttccttcaaagaacttaggagaagcacgtcgtggtgcatctgatagtca 550
Query: 462 tagatggaatgattcaggtaatagagacatgaacactgatcagaagcgtgagagtaagtg 521
|||| ||||||||||||| || |||| | ||| ||||||| ||||||||||||||
Sbjct: 551 tagacggaatgattcaggaaaccgagaaactaactttgatcagcgacgtgagagtaagtg 610
Query: 522 gaacacgcgctggggtccagatgataaggagcttgaagctcatcgtgaaaaatgga 577
|||||| || |||||||| || ||||||||| |||| || ||||||||||||||
Sbjct: 611 gaacacacgttggggtcctgacaataaggagccagaaggtcctcgtgaaaaatgga 666
>gnl|LJGI|AV778939 similar to UniRef100_Q2S717 Cluster: Outer membrane protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Outer membrane protein
- Hahella chejuensis (strain KCTC 2396), partial (4%)
Length = 582
Score = 131 bits (66), Expect = 5e-29
Identities = 333/422 (78%)
Strand = Plus / Plus
Query: 1891 gaagctgaaaataggtttttggagtcactcatgtctggtagcaagagcagtcccacactt 1950
|||||||||||||||||| ||||| || |||||||||||||||| |||||||| |||||
Sbjct: 124 gaagctgaaaataggtttatggagccattcatgtctggtagcaaaagcagtcctgcactt 183
Query: 1951 gaaagtctgacattgccagaaggtttacaaggatttatgggaaataattctggtaatatg 2010
|| || |||| ||| | |||||||| || || || | |||||| ||||||||| | |
Sbjct: 184 gacagcctgaaattatctgaaggtttgcatgggttcgttggaaatgattctggtagtttt 243
Query: 2011 ggcccgtcaggagttgatggtggaagcgatccttacttgctggccaaaaggctggcactt 2070
||| | |||||||| ||| |||||||| | | ||||| | ||||| ||||||||||||
Sbjct: 244 ggctcatcaggagtagatagtggaagcaacctttactcagttgccaataggctggcactt 303
Query: 2071 gaacgacagaggtccttacccaatccttatccatattggccaggggtagaagctccatct 2130
||||| |||| |||||||||||| ||||| |||||| |||| ||| || || || ||
Sbjct: 304 gaacgccagatgtccttacccaaaccttacccatatgggcctgggcgggatgcaccttca 363
Query: 2131 cttccgccgaaatcagacattgttccagatgcatcacaacattcaaaactcttgccttcg 2190
| | || | |||| | ||||| || |||||||||| || |||||||||||| ||||
Sbjct: 364 gtcgccccaacatcaaatattgtccctgatgcatcactgcaatcaaaactcttgtcttca 423
Query: 2191 ttgagtgacaattctcgtcagtttcagtcccaaaattctgagttgttctcaatcatccaa 2250
||| ||| ||||| | || ||||||| |||||||||||| | |||||||||||
Sbjct: 424 gtgaatgataattcccaccaacctcagtccgtgaattctgagttgatgtcaatcatccag 483
Query: 2251 ggattatccgacagggcatccactggtttgaataatggtgttcctggatggacaaattat 2310
|||||||| |||||| |||| | ||| | |||||||||| | |||| | | ||||||||
Sbjct: 484 ggattatctgacaggacatctgcaggtgtaaataatggtgctgctggttagccaaattat 543
Query: 2311 cc 2312
||
Sbjct: 544 cc 545