Miyakogusa Predicted Gene

Lj5g3v2297840.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2297840.1 Non Chatacterized Hit- tr|C5WTV9|C5WTV9_SORBI
Putative uncharacterized protein Sb01g043940
OS=Sorghu,31.73,0.000000000000006,PUTATIVE UNCHARACTERIZED PROTEIN
B11N2.240 (PUTATIVE UNCHARACTERIZED PROTEIN),NULL; AUXILIN/CYCLIN
G,CUFF.57291.1
         (1989 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP054921 similar to UniRef100_Q10QF7 Cluster: Expressed...   519   e-146

>gnl|LJGI|BP054921 similar to UniRef100_Q10QF7 Cluster: Expressed protein; n=1; Oryza
            sativa Japonica Group|Rep: Expressed protein - Oryza
            sativa subsp. japonica (Rice), partial (14%)
          Length = 539

 Score =  519 bits (262), Expect = e-146
 Identities = 262/262 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1728 agggaaggaaggaaacatgcgctcgctgctatcaacattacaacacgtgctttggccggg 1787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539  agggaaggaaggaaacatgcgctcgctgctatcaacattacaacacgtgctttggccggg 480

                                                                        
Query: 1788 gtctggctggaagcctgtgccacttgttgatataattgaagggaatgcggtgaaaagatc 1847
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479  gtctggctggaagcctgtgccacttgttgatataattgaagggaatgcggtgaaaagatc 420

                                                                        
Query: 1848 ttatcaaagagctttactctgtctgcatccagataagttgcagcaaaagggtgctacttc 1907
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419  ttatcaaagagctttactctgtctgcatccagataagttgcagcaaaagggtgctacttc 360

                                                                        
Query: 1908 agaccaaaaatacactgcagaaaaagtttttgatattttacaggaagcttggacacaatt 1967
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359  agaccaaaaatacactgcagaaaaagtttttgatattttacaggaagcttggacacaatt 300

                                  
Query: 1968 caataatgtcggtgctctataa 1989
            ||||||||||||||||||||||
Sbjct: 299  caataatgtcggtgctctataa 278