Miyakogusa Predicted Gene

Lj5g3v2295690.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2295690.4 tr|G7IAY2|G7IAY2_MEDTR Callose synthase
OS=Medicago truncatula GN=MTR_1g116370 PE=4
SV=1,91.47,0,Glucan_synthase,Glycosyl transferase, family 48;
seg,NULL; SUBFAMILY NOT NAMED,Callose synthase; LYS,CUFF.57288.4
         (2109 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosy...   307   2e-82

>gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosyl transferase, family
            48; n=1; Medicago truncatula|Rep: Glycosyl transferase,
            family 48 - Medicago truncatula (Barrel medic), partial
            (15%)
          Length = 563

 Score =  307 bits (155), Expect = 2e-82
 Identities = 274/311 (88%), Gaps = 2/311 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1801 aagaagcatgacggtgtgagattccccagtattcttggacttagggagcatatattcac- 1859
            ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||| || 
Sbjct: 1    aagaagcatgatggggtgaggttcccaagtattcttggacttagggagcatatatttacn 60

                                                                        
Query: 1860 tggaagtgtttcttctcttg-catggtttatgtctaatcaagagacaagttttgtgacaa 1918
            ||||||||||||||| || | ||||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 61   tggaagtgtttcttcgctgggcatggttcatgtcaaatcaggagacaagtttcgtgacaa 120

                                                                        
Query: 1919 ttggtcagagattgttggctaatccactgagagttcgcttccactatggtcaccctgatg 1978
            ||||||| ||||||||||||||||| ||||  ||||| |||||||||||||| || ||||
Sbjct: 121  ttggtcaaagattgttggctaatcccctgaaggttcgtttccactatggtcatcccgatg 180

                                                                        
Query: 1979 tttttgatcggctttttcacctcacaagagggggtgtcagcaaagcctccaaggttataa 2038
            | || ||| ||||||||||||| ||||||||||||||||| |||||||   ||||||| |
Sbjct: 181  tcttcgataggctttttcacctgacaagagggggtgtcagtaaagcctgggaggttatca 240

                                                                        
Query: 2039 acttgagcgaagatatctttgctggcttcaactctacacttcgtgaaggaaatgttactc 2098
            |  | || |||||||| ||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 241  atctaagtgaagatatttttgctggcttcaactctacactccgggaaggaaatgttaccc 300

                       
Query: 2099 atcatgagtac 2109
            |||||||||||
Sbjct: 301  atcatgagtac 311