Miyakogusa Predicted Gene
- Lj5g3v2290070.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2290070.3 Non Chatacterized Hit- tr|I1LFF7|I1LFF7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11683
PE,86.96,0,Clp1,Pre-mRNA cleavage complex II Clp1;
CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P,NULL,CUFF.60765.3
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69907 similar to UniRef100_A7PMM8 Cluster: Chromosome... 1281 0.0
gnl|LJGI|TC78552 similar to UniRef100_A7PMM8 Cluster: Chromosome... 777 0.0
>gnl|LJGI|TC69907 similar to UniRef100_A7PMM8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 771
Score = 1281 bits (646), Expect = 0.0
Identities = 646/646 (100%)
Strand = Plus / Plus
Query: 1 atggcgtatggtggtggtgcgggtgcaggttcaggttcaggtgcagttgcaggtggttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggcgtatggtggtggtgcgggtgcaggttcaggttcaggtgcagttgcaggtggttcg 185
Query: 61 agtacaattaagcaagtcaaattggaaagagaaagcgaactgagaattgaagtcggtaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 agtacaattaagcaagtcaaattggaaagagaaagcgaactgagaattgaagtcggtaac 245
Query: 121 gacgcacctcttcgccttcgactccttaacggcactgctgagattttcggcactgaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gacgcacctcttcgccttcgactccttaacggcactgctgagattttcggcactgaactc 305
Query: 181 ccccctgaaatctggctcaatttccctcccaggctcaagtttgctgtgtttacttggtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccccctgaaatctggctcaatttccctcccaggctcaagtttgctgtgtttacttggtac 365
Query: 241 ggtgcgacgattgaaatggatggtagtaccgagactgattatactgcggacgagacgccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggtgcgacgattgaaatggatggtagtaccgagactgattatactgcggacgagacgccg 425
Query: 301 atggttagctatgtaaatgtgcatgctgtgttagaagggagaagaagtcgagctaaggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 atggttagctatgtaaatgtgcatgctgtgttagaagggagaagaagtcgagctaaggct 485
Query: 361 tcgccttcagatgatcctgagtcttcgcagggccctagggtgattgttgtaggacctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcgccttcagatgatcctgagtcttcgcagggccctagggtgattgttgtaggacctaca 545
Query: 421 gactctggaaagagtaccttgtcaaggatgcttcttagttgggcagctaaacaaggttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gactctggaaagagtaccttgtcaaggatgcttcttagttgggcagctaaacaaggttgg 605
Query: 481 aagcctacttttattgacctagatattggccaaggatctataacaattcctggatgcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aagcctacttttattgacctagatattggccaaggatctataacaattcctggatgcatt 665
Query: 541 gctgctactccaattgaaatgcccattgatcccgtggagggaatccctcttgaaattcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gctgctactccaattgaaatgcccattgatcccgtggagggaatccctcttgaaattcct 725
Query: 601 cttgtttactttcacgggcactcagctccaagtaataatactgccg 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 cttgtttactttcacgggcactcagctccaagtaataatactgccg 771
>gnl|LJGI|TC78552 similar to UniRef100_A7PMM8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 569
Score = 777 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Plus
Query: 926 actcaaaagtccgtcaaaatgccagaagttataagataagggaatacttctatggccttg 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actcaaaagtccgtcaaaatgccagaagttataagataagggaatacttctatggccttg 60
Query: 986 gaaatgacctttctccacattctaatattgcaaattttagtgacttgtttgtttatcgaa 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaatgacctttctccacattctaatattgcaaattttagtgacttgtttgtttatcgaa 120
Query: 1046 ttggtggtgggccacaggcccctcgctcagccttgccgattggtgcagaacctgctgcag 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggtggtgggccacaggcccctcgctcagccttgccgattggtgcagaacctgctgcag 180
Query: 1106 atccaaccagactcgttcctgtaaatataaatcatgatttgcttcatgcagtccttgctg 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atccaaccagactcgttcctgtaaatataaatcatgatttgcttcatgcagtccttgctg 240
Query: 1166 tctcatttgccaaggaacccgatgagatcatttcaagcaatgttgctggctttatctacg 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctcatttgccaaggaacccgatgagatcatttcaagcaatgttgctggctttatctacg 300
Query: 1226 taacagacattgacattcagagaaagaagataacctaccttgcaccatctgctggagaac 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taacagacattgacattcagagaaagaagataacctaccttgcaccatctgctggagaac 360
Query: 1286 ttccaagcaagtatttgattattggaaatata 1317
||||||||||||||||||||||||||||||||
Sbjct: 361 ttccaagcaagtatttgattattggaaatata 392