Miyakogusa Predicted Gene
- Lj5g3v2288720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2288720.1 Non Chatacterized Hit- tr|D7LJS1|D7LJS1_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,38.66,3e-17,seg,NULL,CUFF.57189.1
(1071 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS327920 similar to UniRef100_A7Q430 Cluster: Chromosom... 1265 0.0
gnl|LJGI|FS354252 weakly similar to UniRef100_A7Q430 Cluster: Ch... 446 e-124
gnl|LJGI|TC70514 weakly similar to UniRef100_A7Q430 Cluster: Chr... 238 6e-62
>gnl|LJGI|FS327920 similar to UniRef100_A7Q430 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 687
Score = 1265 bits (638), Expect = 0.0
Identities = 638/638 (100%)
Strand = Plus / Plus
Query: 1 atggctgcaacacttctaacatgtgacgttgcagatgatgattacattgacatggaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggctgcaacacttctaacatgtgacgttgcagatgatgattacattgacatggaagtg 109
Query: 61 agctcattctccaacttgtgtcattctgtaacctctcatcatctacaacatggagaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 agctcattctccaacttgtgtcattctgtaacctctcatcatctacaacatggagaattt 169
Query: 121 gagttccacatgtcctccattgttccagaaaaagaagcaataacttccccagctgacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gagttccacatgtcctccattgttccagaaaaagaagcaataacttccccagctgacgag 229
Query: 181 cttttctacaaaggaaagctcctccctcttcaccttcccccaaggctacaaatggttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cttttctacaaaggaaagctcctccctcttcaccttcccccaaggctacaaatggttgaa 289
Query: 241 aaactccttcaaaactcaaactctccttttgaagaggagaaaaatgtttttgaagagtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aaactccttcaaaactcaaactctccttttgaagaggagaaaaatgtttttgaagagtac 349
Query: 301 tatagcaccccattagccactactacctacacaacaccaaccacaggaaccccatttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tatagcaccccattagccactactacctacacaacaccaaccacaggaaccccatttgaa 409
Query: 361 tcctgcaatatctccccatcagattcttgccaagttagcagagaactaaagccagaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcctgcaatatctccccatcagattcttgccaagttagcagagaactaaagccagaagag 469
Query: 421 tattatagccttgattacctagaagatacaacaagtggatttgttgttgaaaaccagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tattatagccttgattacctagaagatacaacaagtggatttgttgttgaaaaccagaag 529
Query: 481 aagtcatggaccaagaaactgaagcagtcttcactcggttcaaagttgaaggcttcaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aagtcatggaccaagaaactgaagcagtcttcactcggttcaaagttgaaggcttcaagg 589
Query: 541 gcttatctcaagtcttggtttggaaaatctggttgctcatatgaaacctatgcaacctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gcttatctcaagtcttggtttggaaaatctggttgctcatatgaaacctatgcaacctca 649
Query: 601 acaaaagttgctgatgaaggttcagtttcaaaggccag 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 650 acaaaagttgctgatgaaggttcagtttcaaaggccag 687
>gnl|LJGI|FS354252 weakly similar to UniRef100_A7Q430 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 330
Score = 446 bits (225), Expect = e-124
Identities = 225/225 (100%)
Strand = Plus / Minus
Query: 847 ggttcatcatcattttcactttcaaacaaatcatatggatgtcaaagtctcaaaaggtgc 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggttcatcatcattttcactttcaaacaaatcatatggatgtcaaagtctcaaaaggtgc 271
Query: 907 agcagtgtaaattcagagatagaaaattcaatccagggagcaattgcacactgcaagaag 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agcagtgtaaattcagagatagaaaattcaatccagggagcaattgcacactgcaagaag 211
Query: 967 tcccagcagaagaagaatgcaagtgaagtaggactctactcattgcctgaatccaggaac 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tcccagcagaagaagaatgcaagtgaagtaggactctactcattgcctgaatccaggaac 151
Query: 1027 tcagtttgtgaggatcaagaaagagtagtgctttgtaggggttga 1071
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tcagtttgtgaggatcaagaaagagtagtgctttgtaggggttga 106
>gnl|LJGI|TC70514 weakly similar to UniRef100_A7Q430 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 842
Score = 238 bits (120), Expect = 6e-62
Identities = 208/239 (87%), Gaps = 15/239 (6%)
Strand = Plus / Plus
Query: 848 gttcatcatcattttcactttcaaacaaatcatatggatgtcaaag---tctcaaaaggt 904
|||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 319 gttcataatcattttcactttcaaacaaatcatctggatgtcaaagaagtctcagaaggt 378
Query: 905 gcagcagtgtaaattcagagatagaaaattcaatccagggagcaattgcacactgcaaga 964
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 379 gcaacagtgtaaattcagagatagaaaattccatccagggagcaattgcacactgcaaga 438
Query: 965 agtcccagcag------------aagaagaatgcaagtgaagtaggactctactcattgc 1012
| ||||||||| ||| ||||||||||||| || ||||||||||||||||
Sbjct: 439 attcccagcagatgttctcttcaaaggagaatgcaagtgatgttggactctactcattgc 498
Query: 1013 ctgaatccaggaactcagtttgtgaggatcaagaaagagtagtgctttgtaggggttga 1071
|||||| ||| | ||||||||| ||||||||||||||||| | || |||||||||||||
Sbjct: 499 ctgaattcagaacctcagtttgcgaggatcaagaaagagttgagccttgtaggggttga 557