Miyakogusa Predicted Gene

Lj5g3v2288580.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2288580.1 Non Chatacterized Hit- tr|I1LT21|I1LT21_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,33.05,1e-18,OS07G0107100 PROTEIN,NULL; NUCLEOPORIN-RELATED,NULL;
Dirigent,Plant disease resistance response
prot,NODE_22469_length_1256_cov_148.143311.path2.1
         (687 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78174 similar to UniRef100_A7Q439 Cluster: Chromosome...   630   e-180
gnl|LJGI|AV766359 weakly similar to UniRef100_A7Q439 Cluster: Ch...   297   5e-80
gnl|LJGI|TC76429 similar to UniRef100_A7Q439 Cluster: Chromosome...   276   2e-73

>gnl|LJGI|TC78174 similar to UniRef100_A7Q439 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 490

 Score =  630 bits (318), Expect = e-180
 Identities = 318/318 (100%)
 Strand = Plus / Plus

                                                                       
Query: 370 ctggattctgctgtggttgggagagtgcaagggttctacttggctagctcattggatggt 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctggattctgctgtggttgggagagtgcaagggttctacttggctagctcattggatggt 60

                                                                       
Query: 430 accagccagagcgtggtgctcacaatcctgctgcatggtggagagcatcatgatggggtg 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  accagccagagcgtggtgctcacaatcctgctgcatggtggagagcatcatgatggggtg 120

                                                                       
Query: 490 gtggacgatagcataagccttttcggggttcataggactgcgtctccaaattctgaggtt 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggacgatagcataagccttttcggggttcataggactgcgtctccaaattctgaggtt 180

                                                                       
Query: 550 gctgtgattggagggacagggaagtacgagaatgctagagggtatgctgcacttgagacc 609
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctgtgattggagggacagggaagtacgagaatgctagagggtatgctgcacttgagacc 240

                                                                       
Query: 610 cttctgaaggaggaccagcacaccactgatggagttgacaccatactccatttcaatgtc 669
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttctgaaggaggaccagcacaccactgatggagttgacaccatactccatttcaatgtc 300

                             
Query: 670 tacctcacacattactag 687
           ||||||||||||||||||
Sbjct: 301 tacctcacacattactag 318


>gnl|LJGI|AV766359 weakly similar to UniRef100_A7Q439 Cluster: Chromosome chr13
           scaffold_48, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 347

 Score =  297 bits (150), Expect = 5e-80
 Identities = 189/202 (93%)
 Strand = Plus / Minus

                                                                       
Query: 474 gcatcatgatggggtggtggacgatagcataagccttttcggggttcataggactgcgtc 533
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 347 gcatcattatggggtggtggacgatagcataagccttttcggggttcataggaatgcgtc 288

                                                                       
Query: 534 tccaaattctgaggttgctgtgattggagggacagggaagtacgagaatgctagagggta 593
           |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 287 tccaaattctaaggttgctgtgattggagggacagggaagtaccagaatgctaaagggta 228

                                                                       
Query: 594 tgctgcacttgagacccttctgaaggaggaccagcacaccactgatggagttgacaccat 653
           || ||| |||||||||||||||||||||||||||| | || |||||||||||||| ||| 
Sbjct: 227 tgttgcccttgagacccttctgaaggaggaccagcccccccctgatggagttgaccccaa 168

                                 
Query: 654 actccatttcaatgtctacctc 675
           ||||||||||||||| ||||||
Sbjct: 167 actccatttcaatgtttacctc 146


>gnl|LJGI|TC76429 similar to UniRef100_A7Q439 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 691

 Score =  276 bits (139), Expect = 2e-73
 Identities = 139/139 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcatgatatcattggagggtcacacccatcagccagagtagtagcaggaatagtagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atgcatgatatcattggagggtcacacccatcagccagagtagtagcaggaatagtagca 612

                                                                       
Query: 61  aacactgatgtcacaggcctaccattttccaagctcaacaacaacatcttcccaatcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aacactgatgtcacaggcctaccattttccaagctcaacaacaacatcttcccaatcagt 672

                              
Query: 121 ggaggaatcccactagtca 139
           |||||||||||||||||||
Sbjct: 673 ggaggaatcccactagtca 691