Miyakogusa Predicted Gene
- Lj5g3v2264200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2264200.1 tr|B6TZ04|B6TZ04_MAIZE Zinc finger, C2H2 type
family protein OS=Zea mays PE=2 SV=1,44.74,6,zf-C2H2_6,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; zinc finger,Zinc finger,
C2H2-like;,CUFF.57128.1
(544 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68367 homologue to UniRef100_O22086 Cluster: ZPT2-14;... 817 0.0
gnl|LJGI|TC60963 homologue to UniRef100_A7PIZ7 Cluster: Chromoso... 84 1e-15
>gnl|LJGI|TC68367 homologue to UniRef100_O22086 Cluster: ZPT2-14; n=1; Petunia x
hybrida|Rep: ZPT2-14 - Petunia hybrida (Petunia),
partial (43%)
Length = 808
Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Plus
Query: 133 cgtgtctttgagtgcaagacatgcaaccggaagttccagtcttttcaggcgctcggtggc 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cgtgtctttgagtgcaagacatgcaaccggaagttccagtcttttcaggcgctcggtggc 313
Query: 193 caccgtgcgagccacaagaagccgaggttggaagatggaggtgagagtaatgatcatggt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caccgtgcgagccacaagaagccgaggttggaagatggaggtgagagtaatgatcatggt 373
Query: 253 tcatcaccaccaaaggctaaaactcatgagtgctccatttgtggattggagttttcaata 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcatcaccaccaaaggctaaaactcatgagtgctccatttgtggattggagttttcaata 433
Query: 313 gggcaagctttgggtggacacatgaggcgtcacaaaacaccttcaaataaaggatccgcg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gggcaagctttgggtggacacatgaggcgtcacaaaacaccttcaaataaaggatccgcg 493
Query: 373 actactagtagcagtggtggtagcggtagtggtactattgatacttcagcaaacagggag 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 actactagtagcagtggtggtagcggtagtggtactattgatacttcagcaaacagggag 553
Query: 433 aaggaaaacaggagggttttgtttccagatttaaatttgactcctatagagaatggtctt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaggaaaacaggagggttttgtttccagatttaaatttgactcctatagagaatggtctt 613
Query: 493 gtgtttttgaagattggacaagcaactcctctagttgattgtttcaattgaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtgtttttgaagattggacaagcaactcctctagttgattgtttcaattgaa 665
Score = 176 bits (89), Expect = 9e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 atgatgaagagagaattcagagaaattgatcatagcataaccatggcaaactacttgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgatgaagagagaattcagagaaattgatcatagcataaccatggcaaactacttgatg 181
Query: 61 ttgctttctcagcagggaggtccatatga 89
|||||||||||||||||||||||||||||
Sbjct: 182 ttgctttctcagcagggaggtccatatga 210
>gnl|LJGI|TC60963 homologue to UniRef100_A7PIZ7 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 776
Score = 83.8 bits (42), Expect = 1e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 253 tcatcaccaccaaaggctaaaactcatgagtgctccatttgtggattggagttttcaata 312
|||||||| |||||| |||| |||||||| ||||| |||||||| ||||||||| |||||
Sbjct: 354 tcatcacctccaaagcctaagactcatgaatgctcaatttgtgggttggagtttgcaata 413
Query: 313 gggcaagctttgggtggacacatgag 338
|| ||||| || || |||||||||||
Sbjct: 414 ggacaagccttaggaggacacatgag 439