Miyakogusa Predicted Gene
- Lj5g3v2263870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2263870.1 Non Chatacterized Hit- tr|I1NF34|I1NF34_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28724
PE,82,0,CHLOROPLAST NUCLEIOD DNA-BINDING-RELATED,NULL; ASPARTYL
PROTEASES,Peptidase A1; seg,NULL; Acid prote,CUFF.57304.1
(1504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77841 weakly similar to UniRef100_A2Q7X1 Cluster: Sim... 811 0.0
gnl|LJGI|TC78245 similar to UniRef100_A7QNM3 Cluster: Chromosome... 652 0.0
gnl|LJGI|TC73015 similar to UniRef100_A7QNM3 Cluster: Chromosome... 101 1e-20
>gnl|LJGI|TC77841 weakly similar to UniRef100_A2Q7X1 Cluster: Similarity: shows
similarity to several oxidoreductases with different
specificities; n=1; Aspergillus niger|Rep: Similarity:
shows similarity to several oxidoreductases with
different specificities - Aspergillus niger, partial
(8%)
Length = 546
Score = 811 bits (409), Expect = 0.0
Identities = 411/412 (99%)
Strand = Plus / Plus
Query: 1 atgtcatccacaaaatttgcacaactacaactacaagccaccatggtcatggtgcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atgtcatccacaaaatttgcacaactacaactacaagccaccatggtcatggtgcttctt 194
Query: 61 ctgttgctgttgagcattctaaccacctctacttccactccaacttcatcatcaccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctgttgctgttgagcattctaaccacctctacttccactccaacttcatcatcaccttcc 254
Query: 121 catcataacctgacataccctcattttcagcagctcaatgtgaaagcaatcattgcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 catcataacctgacataccctcattttcagcagctcaatgtgaaagcaatcattgcagaa 314
Query: 181 actaaactgaacccgaaaccaaagcctactaaaatacccaaacaaccccataaacagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 actaaactgaacccgaaaccaaagcctactaaaatacccaaacaaccccataaacagcaa 374
Query: 241 aacctcaacacagagtctgagagtgaaggatcaggaaaattgaaactgaagctaattcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aacctcaacacagagtctgagagtgaaggatcaggaaaattgaaactgaagctaattcac 434
Query: 301 agagataaaatcagcaccttcaacacttcccgtgatcatcgcagccgattcaaagcacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 agagataaaatcagcaccttcaacacttcccgtgatcatcgcagccgattcnaagcacga 494
Query: 361 atgcagagagacgccaaaagggtcgccgccgttgcccgccgcctcgcaatcg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgcagagagacgccaaaagggtcgccgccgttgcccgccgcctcgcaatcg 546
>gnl|LJGI|TC78245 similar to UniRef100_A7QNM3 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(26%)
Length = 456
Score = 652 bits (329), Expect = 0.0
Identities = 336/337 (99%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 1169 cagtggcttataacgctttccgggatgcttttatcacccaaa-ccacaaacctgcctcgg 1227
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 cagtggcttataacgctttccgggatgcttttatcacccaaaaccacaaacctgcctcgg 60
Query: 1228 gcctctggagtatccatttttgacacttgttatgatttatttgggtttgtgtcggttcga 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcctctggagtatccatttttgacacttgttatgatttatttgggtttgtgtcggttcga 120
Query: 1288 gtcccgactgtatccttttatttctcgggtgggcctgtcctgaccctcccagctaggaac 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcccgactgtatccttttatttctcgggtgggcctgtcctgaccctcccagctaggaac 180
Query: 1348 ttcttaattcccgttgataatgtggggactttctgctttgcatttgcaccttctccttcc 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcttaattcccgttgataatgtggggactttctgctttgcatttgcaccttctccttcc 240
Query: 1408 gggctttccatcatagggaacatccagcaagaaggaattgaaatttcgatagatcaagca 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggctttccatcatagggaacatccagcaagaaggaattgaaatttcgatagatcaagca 300
Query: 1468 agtgggtttgtaggatttggacccaatgtctgttaag 1504
|||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgggtttgtaggatttggacccaatgtctgttaag 337
>gnl|LJGI|TC73015 similar to UniRef100_A7QNM3 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 1671
Score = 101 bits (51), Expect = 1e-20
Identities = 159/195 (81%)
Strand = Plus / Plus
Query: 696 gaggtgccgctatgaggtttcttacggcgacggatcctacaccaaagggacgctcgccct 755
||||||| ||||||||||||| || || ||||| |||| ||| |||||||| ||||||||
Sbjct: 708 gaggtgcggctatgaggtttcctatggggacgggtcctccacgaaagggacactcgccct 767
Query: 756 tgagacactcactttcgggcgaaccgtgatccgaaacgtggcaatcgggtgcgggcacag 815
||||||||||| | ||||| || ||||| |||| || ||||||||||| ||| |
Sbjct: 768 ggagacactcacggtggggcggacggtgataagaaaaaccgccatcgggtgcggccactg 827
Query: 816 gaaccagggtatgtttgttggagctgctgggcttttgggacttggaggtgggcccatgtc 875
||| |||| ||||| || ||||| || || | ||||| || |||||||||||||||||
Sbjct: 828 gaatgagggaatgttcgtcggagcggccggcttgttgggcctcggaggtgggcccatgtc 887
Query: 876 ttttgtgggccagct 890
||||||||||||||
Sbjct: 888 gtttgtgggccagct 902