Miyakogusa Predicted Gene
- Lj5g3v2262850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2262850.1 tr|Q9ZTK0|Q9ZTK0_SOLLC Hcr2-0A OS=Solanum
lycopersicum GN=Hcr2-0A PE=4 SV=1,32.27,3e-18,no description,NULL;
LEURICHRPT,NULL; L domain-like,NULL; seg,NULL; FAMILY NOT NAMED,NULL;
Leucine-r,CUFF.57297.1
(1774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63562 similar to UniRef100_A7QNM9 Cluster: Chromosome... 1259 0.0
gnl|LJGI|TC64775 similar to UniRef100_A7QNM9 Cluster: Chromosome... 928 0.0
gnl|LJGI|AV420563 weakly similar to UniRef100_A7QNM9 Cluster: Ch... 496 e-139
>gnl|LJGI|TC63562 similar to UniRef100_A7QNM9 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (37%)
Length = 851
Score = 1259 bits (635), Expect = 0.0
Identities = 645/647 (99%), Gaps = 1/647 (0%)
Strand = Plus / Plus
Query: 1 atgcattttttcacatgggttttcaaccttgttctgatattttcattcctgagacagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atgcattttttcacatgggttttcaaccttgttctgatattttcattcctgagacagttc 265
Query: 61 tcagaaagtgtaacagtagcagcactgtctccttccccaatctgttcagaagaagacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcagaaagtgtaacagtagcagcactgtctccttccccaatctgttcagaagaagacaga 325
Query: 121 gcttctcttctgagcttcaaagcaagcattttcaaggacacaacagagactctttcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcttctcttctgagcttcaaagcaagcattttcaaggacacaacagagactctttcttca 385
Query: 181 tggacaagcagggattgctgtgatggaggctgggaaggagttcagtgcaatccatccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggacaagcagggattgctgtgatggaggctgggaaggagttcagtgcaatccatccaca 445
Query: 241 ggtagagtcaatgtgttgcagatacagaggcctgatagagacagtgccagttatatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggtagagtcaatgtgttgcagatacagaggcctgatagagacagtgccagttatatgaaa 505
Query: 301 ggctctctttctccctcactaggaaatttgcatttcttggaggtattggtgataagtggg 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggctctctttctccctcactaagaaatttgcatttcttggaggtattggtgataagtggg 565
Query: 361 atgaagcacattacaggaccaattcctactagcctttcaaatttaacccacctcacacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atgaagcacattacaggaccaattcctactagcctttcaaatttaacccacctcacacag 625
Query: 421 ctagttctggaagacaattcccttggagggtgcattcctccaaatttaggccatttacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctagttctggaagacaattcccttggagggtgcattcctccaaatttaggccatttacct 685
Query: 481 ttgctgcagacccttatactgagtgggaaccatctcaaaggccagatccctccaacaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttgctgcagacccttatactgagtgggaaccatctcaaaggccagatccctccaacaata 745
Query: 541 gggagcctcagaaaccttatccaagttaatttagcaagaaattttctgacaggtcctgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gggagcctcagaaaccttatccaagttaatttagcaagaaattttctgacaggtcctgtc 805
Query: 601 cccctcagtttcaaaacccttggaagtttgcagtaccttgatctcag 647
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 806 cccctcagtttc-aaacccttggaagtttgcagtaccttgatctcag 851
>gnl|LJGI|TC64775 similar to UniRef100_A7QNM9 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(31%)
Length = 648
Score = 928 bits (468), Expect = 0.0
Identities = 468/468 (100%)
Strand = Plus / Plus
Query: 1307 agggttcgctgtcagcaatcataaataacaggacaagcagctcattggaggtcatagatg 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggttcgctgtcagcaatcataaataacaggacaagcagctcattggaggtcatagatg 60
Query: 1367 tatcaaacaatttcatttcaggtcattttccagaatttgcagaaggctcaagcttgaagg 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatcaaacaatttcatttcaggtcattttccagaatttgcagaaggctcaagcttgaagg 120
Query: 1427 tgctgaacttgggaagcaacaacatatcaggtccaatcccagtttctatttcaaatttga 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctgaacttgggaagcaacaacatatcaggtccaatcccagtttctatttcaaatttga 180
Query: 1487 tagaccttgagagattggacatatcaagaaatcacatattgggagcaattccttcaagtc 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagaccttgagagattggacatatcaagaaatcacatattgggagcaattccttcaagtc 240
Query: 1547 taggtcagttgctggagctgcaatggcttgatgtatccataaacagcctagcaggatcaa 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taggtcagttgctggagctgcaatggcttgatgtatccataaacagcctagcaggatcaa 300
Query: 1607 ttcctagtagcttgtcacagataactaatctgaagcatgcaagcttcagggcaaacaggc 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcctagtagcttgtcacagataactaatctgaagcatgcaagcttcagggcaaacaggc 360
Query: 1667 tttgtggagaaataccacaaacaagaccactaaacatctttccagcagctgcttacgccc 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgtggagaaataccacaaacaagaccactaaacatctttccagcagctgcttacgccc 420
Query: 1727 acaacttgtgcttatgtggtaaacctttgcagccatgcaagggataga 1774
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaacttgtgcttatgtggtaaacctttgcagccatgcaagggataga 468
>gnl|LJGI|AV420563 weakly similar to UniRef100_A7QNM9 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(8%)
Length = 252
Score = 496 bits (250), Expect = e-139
Identities = 250/250 (100%)
Strand = Plus / Plus
Query: 937 agaaatggtctctcaggtcccttacctgctattcctttcaagggtatccctgcccttttg 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agaaatggtctctcaggtcccttacctgctattcctttcaagggtatccctgcccttttg 62
Query: 997 tccatagacctgtcttacaataatctcagcctgggaagtgtccctgactggattagaagc 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tccatagacctgtcttacaataatctcagcctgggaagtgtccctgactggattagaagc 122
Query: 1057 aagcaactcaaagatgttcatctagctgggtgtgaattgaagggagatcttcctcacttc 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aagcaactcaaagatgttcatctagctgggtgtgaattgaagggagatcttcctcacttc 182
Query: 1117 atcagggctcactctttgagctccattgacctatcagataactgcctagttggtggcatt 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atcagggctcactctttgagctccattgacctatcagataactgcctagttggtggcatt 242
Query: 1177 tctagtttct 1186
||||||||||
Sbjct: 243 tctagtttct 252