Miyakogusa Predicted Gene
- Lj5g3v2261780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2261780.2 tr|Q05AP3|Q05AP3_DANRE Zgc:152777 OS=Danio rerio
GN=nsrp1 PE=2 SV=1,40.44,1e-18,DUF2040,Domain of unknown function
DUF2040; seg,NULL; coiled-coil,NULL; INNER MEMBRANE
PROTEIN,NULL,CUFF.57118.2
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71599 similar to UniRef100_Q8S8I5 Cluster: Expressed ... 1873 0.0
>gnl|LJGI|TC71599 similar to UniRef100_Q8S8I5 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (47%)
Length = 1122
Score = 1873 bits (945), Expect = 0.0
Identities = 954/957 (99%)
Strand = Plus / Plus
Query: 1 atgagcaagtatgggttgaaccttcggcctgccaagcagaagcagaagccaccaaggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgagcaagtatgggttgaaccttcggcctgccaagcagaagcagaagccaccaaggcct 133
Query: 61 cccctcgccaccccttttggctttaacgatgatgatgaggatgacgtcgagagagaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cccctcgccaccccttttggctttaacgatgatgatgaggatgacgtcgagagagaaatc 193
Query: 121 gctctccaggctgcaaagaaaaaatctctcaaggaagttgaggagcagcaaaagaaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gctctccaggctgcaaagaaaaaatctctcaaggaagttgaggagcagcaaaagaaggcc 253
Query: 181 ttggaagaagatccatccgtatttgattatgatggagtctatgaaaaaatgaaagagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttggaagaagatccatccgtatttgattatgatggagtctatgaaaaaatgaaagagaaa 313
Query: 241 gttgcaaaaccactgatacaagatcgtgaagagagaaagccaaagtatatccaaaatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gttgcaaaaccactgatacaagatcgtgaagagagaaagccaaagtatatccaaaatctg 373
Query: 301 atgaaaaaagccaaggagcgagagcagtatcgcgagattgtgtacgagaaaaaggttgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atgaaaaaagccaaggagcgagagcagtatcgcgagattgtgtacgagaaaaaggttgcc 433
Query: 361 aaggagagagacaaagatgatcatctctatgctgacaaagacaaatttgttactgaagcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aaggagagagacaaagatgatcatctctatgctgacaaagacaaatttgttactgaagcg 493
Query: 421 tatagaaggaagcttgctgaacgggagagacagatggagcaagaaagaatccgtgaactt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 494 tatagaaggaagcttgctgaacgggagagacagatggagctagaaagaatccgtgaactt 553
Query: 481 caagaggagagagatgatgttacaaagaagaaagactttttgcttgatttttattcaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 caagaggagagagatgatgttacaaagaagaaagactttttgcttgatttttattcaaac 613
Query: 541 cttgatagaaatgttgcttatggagcaaaagatgctcaagggaggaaacgtgacaaccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cttgatagaaatgttgcttatggagcaaaagatgctcaagggaggaaacgtgacaaccag 673
Query: 601 gctgaacatagagttccagagacacatgagggggtgaaccctgatgcatcagacaggcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gctgaacatagagttccagagacacatgagggggtgaaccctgatgcatcagacaggcat 733
Query: 661 caggagcatggtgatgcatcggatgaaagacaacattcattgggtaactcaagtccacca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 caggagcatggtgatgcatcggatgaaagacaacattcattgggtaactcaagtccacca 793
Query: 721 gtggagttttccaaggaaaaaattggtgatcagggtgaaccttctaatccttccaataga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtggagttttccaaggaaaaaattggtgatcagggtgaaccttctaatccttccaataga 853
Query: 781 agtatcagccccacggatatgaagccaaatcctgaggctcttgtagaagaagaaaataag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 agtatcagccccacggatatgaagccaaatcctgaggctcttgtagaagaagaaaataag 913
Query: 841 ccagttgaacagccatcagcttctcaaccgaaggccgatcatcacaaaagaaatcaagat 900
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 914 ccagttgaatagccatcagcttctcagccgaaggccgatcatcacaaaagaaatcaagat 973
Query: 901 gctgtggctgcagcaaaggaacgttttctggcacgtaagaaggcaaaggaacagtga 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 gctgtggctgcagcaaaggaacgttttctggcacgtaagaaggcaaaggaacagtga 1030