Miyakogusa Predicted Gene

Lj5g3v2261770.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2261770.1 Non Chatacterized Hit- tr|I1NF40|I1NF40_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,75.93,0.000000000000002,
,NODE_97802_length_753_cov_9.078353.path1.1
         (161 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO027443                                                      86   7e-17
gnl|LJGI|TC61383 similar to UniRef100_A7Q2F5 Cluster: Chromosome...    50   4e-06

>gnl|LJGI|GO027443 
          Length = 826

 Score = 85.7 bits (43), Expect = 7e-17
 Identities = 102/120 (85%), Gaps = 5/120 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtggcaattctagatcatgttatggatgaagttgaagaattggggaaaatggcacac 60
           ||||||||||  |||||||||||| | |||| ||| ||||| ||||||||| |||||  |
Sbjct: 156 atggtggcaaagctagatcatgttctagatgcagtggaagacttggggaaattggcatgc 97

                                                                       
Query: 61  tttagagagttcag---gcatgatgatgagattgttgtgacttgtgaaagaccaaaaatg 117
           ||||||||||||||   | ||||||||||||||||  |||||| ||| ||||||||||||
Sbjct: 96  tttagagagttcagagaggatgatgatgagattgt--tgacttttgagagaccaaaaatg 39


>gnl|LJGI|TC61383 similar to UniRef100_A7Q2F5 Cluster: Chromosome chr1 scaffold_46,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_46, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 767

 Score = 50.1 bits (25), Expect = 4e-06
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 66  agagttcaggcatgatgatgagattgttgtgacttgtgaaagaccaaaaatgaatat 122
           |||||||||  |||||||||||||| || |||||| ||| |||| ||||||| ||||
Sbjct: 613 agagttcagagatgatgatgagattcttctgacttatgagagactaaaaatgcatat 669