Miyakogusa Predicted Gene

Lj5g3v2259690.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2259690.2 Non Chatacterized Hit- tr|I1NF47|I1NF47_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.5,0,SUBFAMILY NOT
NAMED,NULL; RING ZINC FINGER PROTEIN,NULL; Ring finger,Zinc finger,
RING-type; seg,NUL,CUFF.57117.2
         (476 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79057 weakly similar to UniRef100_Q0DAS8 Cluster: Os0...   944   0.0  

>gnl|LJGI|TC79057 weakly similar to UniRef100_Q0DAS8 Cluster: Os06g0633500 protein;
            n=2; Oryza sativa|Rep: Os06g0633500 protein - Oryza
            sativa subsp. japonica (Rice), partial (53%)
          Length = 1304

 Score =  944 bits (476), Expect = 0.0
 Identities = 476/476 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgcggaaccggatcttggattgggctgacattctgatgggaatggaagacaactccata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570  atgcggaaccggatcttggattgggctgacattctgatgggaatggaagacaactccata 629

                                                                        
Query: 61   gagtttcgcctccaggtaccggaatcggaccggtacgtcgggaacccggaggattacgtg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630  gagtttcgcctccaggtaccggaatcggaccggtacgtcgggaacccggaggattacgtg 689

                                                                        
Query: 121  gacgcgacggagtacgaggcgttgatgcagatactggcggagagcgacggaggtgggagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690  gacgcgacggagtacgaggcgttgatgcagatactggcggagagcgacggaggtgggagg 749

                                                                        
Query: 181  aagggagctccgccggcgtcgaaggcggcggtggaagctctgccgacggtgaagatcatg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750  aagggagctccgccggcgtcgaaggcggcggtggaagctctgccgacggtgaagatcatg 809

                                                                        
Query: 241  tcggagagtgatactgtggcgtgtgctatttgtaaggacttgatgggtgttggagaatca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810  tcggagagtgatactgtggcgtgtgctatttgtaaggacttgatgggtgttggagaatca 869

                                                                        
Query: 301  gctaagaggttaccgtgtgggcatcagtaccatggagattgcattgttccatggctgagt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870  gctaagaggttaccgtgtgggcatcagtaccatggagattgcattgttccatggctgagt 929

                                                                        
Query: 361  tctagaaattcttgccctgtttgcaggtttcagcttccaacggatgacaaggagtttgag 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930  tctagaaattcttgccctgtttgcaggtttcagcttccaacggatgacaaggagtttgag 989

                                                                    
Query: 421  gaagagagagcttcgggttccggttcgggtcggggtggagctgccactacttgatt 476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990  gaagagagagcttcgggttccggttcgggtcggggtggagctgccactacttgatt 1045