Miyakogusa Predicted Gene
- Lj5g3v2258590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2258590.1 Non Chatacterized Hit- tr|I1LF87|I1LF87_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20745
PE,73.08,0.00000000003,seg,NULL; TCP,Transcription factor,
TCP,CUFF.57098.1
(781 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcript... 525 e-148
gnl|LJGI|GO009362 similar to UniRef100_A7QV04 Cluster: Chromosom... 400 e-111
gnl|LJGI|TC79516 similar to UniRef100_A7QV04 Cluster: Chromosome... 111 7e-24
>gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcription factor
PCF3-like; n=1; Oryza sativa Japonica Group|Rep:
Transcription factor PCF3-like - Oryza sativa subsp.
japonica (Rice), partial (49%)
Length = 771
Score = 525 bits (265), Expect = e-148
Identities = 265/265 (100%)
Strand = Plus / Plus
Query: 435 gccagcttctcctccgtctctgtctcgctccgcggcgcctccaacaactcctcgctctct 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gccagcttctcctccgtctctgtctcgctccgcggcgcctccaacaactcctcgctctct 566
Query: 495 tctccttcgcttgaccacaaacccttgcttgctcctactcctactccgttcattctcggg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctccttcgcttgaccacaaacccttgcttgctcctactcctactccgttcattctcggg 626
Query: 555 aagcgtatacgcaccgacgatgattcctcccccgccgccaaggatgactctgttggacac 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aagcgtatacgcaccgacgatgattcctcccccgccgccaaggatgactctgttggacac 686
Query: 615 tcgcttgttggctctgctgctcctgctggtttgtgggctcttcctgctaggcctgatttt 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcgcttgttggctctgctgctcctgctggtttgtgggctcttcctgctaggcctgatttt 746
Query: 675 ggacagatatggagctttgctgctg 699
|||||||||||||||||||||||||
Sbjct: 747 ggacagatatggagctttgctgctg 771
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 147 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 229
Query: 207 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 289
Query: 267 gcaacagcagttatcagtcaagaaaccgccctccaaggaccgtcacagcaaagtcgacgg 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcaacagcagttatcagtcaagaaaccgccctccaaggaccgtcacagcaaagtcgacgg 349
Query: 327 ccgcggccgccgtatacggatgccaa 352
||||||||||||||||||||||||||
Sbjct: 350 ccgcggccgccgtatacggatgccaa 375
Score = 115 bits (58), Expect = 4e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 atgtgccctcctcctgtctccaccagctcctgccgctcaatcattagacccctgttcc 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 atgtgccctcctcctgtctccaccagctcctgccgctcaatcattagacccctgttcc 75
>gnl|LJGI|GO009362 similar to UniRef100_A7QV04 Cluster: Chromosome undetermined
scaffold_183, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_183,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 750
Score = 400 bits (202), Expect = e-111
Identities = 205/206 (99%)
Strand = Plus / Plus
Query: 147 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 142
Query: 207 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 202
Query: 267 gcaacagcagttatcagtcaagaaaccgccctccaaggaccgtcacagcaaagtcgacgg 326
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 203 gcaacagcagttatcagtcaagaaaccgccccccaaggaccgtcacagcaaagtcgacgg 262
Query: 327 ccgcggccgccgtatacggatgccaa 352
||||||||||||||||||||||||||
Sbjct: 263 ccgcggccgccgtatacggatgccaa 288
>gnl|LJGI|TC79516 similar to UniRef100_A7QV04 Cluster: Chromosome undetermined
scaffold_183, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_183,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 1384
Score = 111 bits (56), Expect = 7e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 671 ttttggacagatatggagctttgctgctgccgccgccgccgcgccggaaatggtgg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttggacagatatggagctttgctgctgccgccgccgccgcgccggaaatggtgg 56